Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g04090 ATGGCTTCAAAGTCCTTTGGGAAAAGGCATGAAGATTGCTCCCGTAGCCCTTCCTCTGGCAAAGAATTGAGTGAAGCGTTTGTGAAATGTAGGAAGTACTGGGTTGAACTCAATGTCATTGGCCTCCATAGGCAGTTTTGGAATGGAATTGATTATAAGATAATGGACAATAGCTTGTTGGCCATAAGCATTGTGGCAACATATCGTTATGATAATGCTAGAAGATATAATGGTACCTTGGTTTATGAAGGTCAAGGAGGAAATCCTATTGTTGGAGAAATGTTTCACTTCGTGATTAAAAACTGGAAGAAGGAAATTATGAGTAATGAGAATTACTGTAATTGA 345 0.3826 MASKSFGKRHEDCSRSPSSGKELSEAFVKCRKYWVELNVIGLHRQFWNGIDYKIMDNSLLAISIVATYRYDNARRYNGTLVYEGQGGNPIVGEMFHFVIKNWKKEIMSNENYCN 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g04090 114 Gene3D - 32 111 IPR036987 -
Vimu7g04090 114 MobiDBLite consensus disorder prediction 1 18 - -
Vimu7g04090 114 MobiDBLite consensus disorder prediction 1 23 - -
Vimu7g04090 114 Pfam SAD/SRA domain 32 88 IPR003105 -
Vimu7g04090 114 SUPERFAMILY PUA domain-like 33 93 IPR015947 -
Vimu7g04090 114 ProSiteProfiles YDG domain profile. 20 114 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g04090 Vimu-Chr7 39147699 39148346 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g04090 35 88 Su(var)3-9 homologs AT1G73100 43.103 1.49e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g04090 - K11420 vra:106770189 150.214