Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g04085 ATGAACGCTATCATATGCTCTGGCTACTTTTTTATCTTGTATCTCTCAAACCTACAACTAGTTGCAGTTGCTGATGATGGTAGTTATGTTCCTACAGAGAACATAGTTCTCAGCTGCGGCTCCAATACTTCAGAATTTGTTCAATATGATGGAAGGAATTGGAATGGGGATATTGTTTCACCGTATGTTCCCTTTGATGCTGACACCAAGTCCCTGGCAGTGAGAGCCCCTAACACTCTTGAATACATTCCAGAAGTTCCCTATATGACTGCAAGGATCTTTTACTCTAAATTCATCTACACCTTCAATGTAACTCCAGGTCCCAAATTCATTCGCCTTCATTTCTACCCAGCTTCCTACATCAATCTCAACATCTCCAATGCTTTCTTATCAGTAAGTGCTGCTAACCTCACTCTTCTCCATAACTTCAGTGCTTCCCTCAACGCTGATTACTATAACTTGGCCTATTTCATGAAAGAATTCATTGTGCATGTTAGTGGGAGTGTTCTACAACTCACTTTCTCCCCATCATATAATGCCTCTCATGCCTTTGCATTTGTGAATGGTATTGAAGTTGTTTCAATGCCACTTAACTTATACACGACGGGTGGTGATGGTGTTCCTCCTACCTTAGTTGGCCATAAGAAATTTGTGAAAATTTATAATGACACTGCCATGGAGAATTTGTACAGATTGAACGTAGGAGGTGAGAAAATCCCACCCAAATATGACACTGGCATGTTTCGGAGTTGGGACGTTGATGAAGATTACATTTTAGGGGCTAATGTTGATATTCGAAACTTTAATATGAGCATGCTGGTTTTGTATTCTGATAATGCTCCACCATATTCAGCCCCAGTAGATGTGTACCGGACATCCCGCTCAATGTCACCTTTTGATGATGGACTTATAAATTTAAATTACAATATGACATGGTTTTTTCCCGTTGATTCTGGTTTCCTTTATCTGGTCAGGCTTCACTTCTGTGAAATTTATCAAGGTATAATAACAAAGGTCAATCAGGTAGTATTTACCATATTTTTAAATAATCAAACAGCTGAAGAGCAATTTGATGTAATTGCTTGGGGTGGGGAGCCCGGTGTTGCTGTACACAGAGATTACGTAGTGATGGTTCCACACGTTAATGAGGGAAAGCAGGATTTGTGGCTTGATCTGCACCCATACAAGGATTCTAAACCCATGTACTATAATGCTTACTTGAATGGTGTGGAGATCTTTAAACTCAGCAATTTCGGTGATAAGAGTCTTGCCGGGCTAAACCCTCCCAAAAACATAGTAAAGGTTCCCCATGTAGCACATTTTAATAAGAGTTCGAAGAAACTCAAATTCTTCCTCATTGGATGTGGACTTCTTGCAGTGGTCGTGCTACCACTTCTCCTTTGTTTACTCCTAATCAGGTTAAAGGTGATCAAGCTTAGAAGGGTCGTTTCACTGTGCGGTCTCACTGTCCACACACCTAATCGAATTGAAAAAGCAAAAAAGTGGTCACTTTGCACTCAATTTTCAATGCGAGAAATAAAATTGGCGACAAATGACTTCCATGAGGATTTACTTATAGGCACTGGTGGATTTGGCAGTGTTTACAAGGGTAGCTTCACCGGTGGCGCAACTTACGTGGCTGTTAAACGTGCCAATCCAATGTCAGAGCAAGGTATTTCAGAATTTGAGGCAGAGATCCTTTTGCTCTCACAGCTTAGGCATCATAACCTGGTATCACTTTTGGGTTATTGCAATGAGGATGGGGAGATGATATTGGTGTATGACTTCATGGCGAATGGAAATCCCGAATGCTATGAAAGCAACAAGTTGACTGAGAAATCTGATATATACTCACTTGGGGTGGTGTTATTGGAGGTTCTGACTGCAAGGCCTGCTGTAAGTGTAGGTGAAGATGATGAGCATATTAATTTGGCTGAATGGACAGTGTCGTGCCTTGAGAATGGAAATGTGGAGGAAATAGTTGACCCCAACTTGAAAGAAAACATAATTAAGGACTGCTTTGAGTTATATTTAGGAGTTGCAATGAAATGTTTGGCTGAAAGAGGGGTGGAAAGGCCATCCATTGGTGAAGTTCTAGAGAGCCTTGTTCTGGCAATGCATCTTCAGAAAAATGGAAATCATAATGCTGCTCTGCAGGGTAATTCAGATTTGACACCTGGGGTTGAGTTCTCTGAAATCATGACGCCTATTGGAATCAAAAGCACTACTAGAAATCACTTGTATTGCGCTACCACTGCTGCATCTTCTGAGCTTTTTTCTGAACTTTCCCGTAAACAACAGGCCAATTGCTTCGTACAAATGGCTTATGGCAAGTGCTATATATCATCATCATTCAATGGAGAAATTTGGGTAGGAGATAGTGTATCTAGTTTCTTGCCTCCAGAGTATGGCAACAGCTCATCCACACTCTTGCTCTCAAACATGAAAGACTCTCTAGTACCAAAAGTTCCATACTCAACAGCAAGAATAACTCATTCTCCATTGACCTACTCCTTTCCTTCCTCCCCTGGCCTTAAATTCATTCGTCTTTACTTTCTCTCATCTTTATATCTGATGACGATCCCCTCCGCCAAGGCTTATTTCTCTGTAAAAGCTGGGCCTTACACTCTTGTAAGTCATTTCAATCCATCAGATTTTGCCGAAGAGCTCAACTCGAAGTTTTTCACCAAGGATTTCTTACTAAATGTTAGGGAAGACAAACTGACCATTACACTTACTCCATCTCCTTTAATTTCCAAAGCATTTGCTTTTGTAAATGGCATTGAGATATTACCTGTGCCCAAAACTATATACTTTCCGGGTTCCAAGGTTCCTGTTCCTTACCTTGGGCACCAGCAAATTTTGTTGACTAATGATGAATATGCACTAGAGACGCTTTACAGAGTTGGCATTTGTGGTGGAGAAAATGCTTTTGGAATGTGGTCAGATGATTCTAGATACATATCTCGTCCACACGTTGGAGGTGTCCTCAATATAAAAAATCTTGCTGTTAGCTTGAATTACACCACTTTATCTTCAAAGGATTACAATTATTCAGCACCAGAGGAGATATATTGGACTGCCAGGACAATGGGTAGTGATGGAGATATTAACATGAAGAACAATTTAACATGGTCTTTCCCTGTTGATTCTGGATTCAAGTACCTTGTTAGGCTTCATTTCTGTGAGATATCTATTGGGGTAACGCAGCCCAATCAAAGGGTGTTCAAAGTGTACATAAACAACCAAACAGCAGAGGAGAGGATGGACGTAGTTGATTCTGCAGGAGCACCATTTACTCCTTTGCACAAGGACTATGTTGTTATGGTTCCTACGGAAAGTGGGAGGAGGAAAGATTTGTGGATCTCGCTTCAACCAAACTTGGAGTCAAAACCAAAATATGCCGATGCCATACTGAATGGAATTGAGATCATGAAGATAAGTGATAGTAATCATAGCCTTGCAGCAATGTTCCGATTGAGAAGCGAACAAAGAAATAAGAAAGTTCAACATGTCATCATTGTGGTTGCTGCTACTTTAGGTACTATCTTCGGATTGGTCTTCACATTTTTTATTAATATCCACAGAGCAGGGAAAAAATTGAAGTGGAGAACTTCTCATATACTTCCATCAAATTCTAGTAGTAATCACAAAAACATTCAACCCACAGTAACCTCAGGTCTTTGCCATCAATTCACACTTGAAGAAATCAGCATAGCTACAAGCAACTTCAGTGAAGATCTTGTCATCGGGGAGGGAGGCTTCGGAAAGGTGTACAAAGGCATCATGCATCATGATGGAGTTACTGCTGTTGCAGTAAAGCGCTCTAATCGTAGATCTGGTCAAGGATATAAAGAGTTTCAAACTGAGATCAATTTTTTCTCATTCTGTCACATGAATCTAGTGTCACTTCTGGGATACTGCCAAGAGGGAAATGAACTGATACTTGTGTATGAATACATGGCTGAGGGGAATGTTAGGCCAGAATGCCTGAGGGCGTTTGTAGACTTAGGCATCCACTGCTTGGCTGATAGAACTGCAGATAGGCCAACTATGGGAGAGGTCCTCAATACTTTAGAGAGGATCCTTTACTTGCAGGATAGTTTAGAGGAACAAGAACGTCATACAATTTCTACAAGTAGCTTGTGA 4149 0.4078 MNAIICSGYFFILYLSNLQLVAVADDGSYVPTENIVLSCGSNTSEFVQYDGRNWNGDIVSPYVPFDADTKSLAVRAPNTLEYIPEVPYMTARIFYSKFIYTFNVTPGPKFIRLHFYPASYINLNISNAFLSVSAANLTLLHNFSASLNADYYNLAYFMKEFIVHVSGSVLQLTFSPSYNASHAFAFVNGIEVVSMPLNLYTTGGDGVPPTLVGHKKFVKIYNDTAMENLYRLNVGGEKIPPKYDTGMFRSWDVDEDYILGANVDIRNFNMSMLVLYSDNAPPYSAPVDVYRTSRSMSPFDDGLINLNYNMTWFFPVDSGFLYLVRLHFCEIYQGIITKVNQVVFTIFLNNQTAEEQFDVIAWGGEPGVAVHRDYVVMVPHVNEGKQDLWLDLHPYKDSKPMYYNAYLNGVEIFKLSNFGDKSLAGLNPPKNIVKVPHVAHFNKSSKKLKFFLIGCGLLAVVVLPLLLCLLLIRLKVIKLRRVVSLCGLTVHTPNRIEKAKKWSLCTQFSMREIKLATNDFHEDLLIGTGGFGSVYKGSFTGGATYVAVKRANPMSEQGISEFEAEILLLSQLRHHNLVSLLGYCNEDGEMILVYDFMANGNPECYESNKLTEKSDIYSLGVVLLEVLTARPAVSVGEDDEHINLAEWTVSCLENGNVEEIVDPNLKENIIKDCFELYLGVAMKCLAERGVERPSIGEVLESLVLAMHLQKNGNHNAALQGNSDLTPGVEFSEIMTPIGIKSTTRNHLYCATTAASSELFSELSRKQQANCFVQMAYGKCYISSSFNGEIWVGDSVSSFLPPEYGNSSSTLLLSNMKDSLVPKVPYSTARITHSPLTYSFPSSPGLKFIRLYFLSSLYLMTIPSAKAYFSVKAGPYTLVSHFNPSDFAEELNSKFFTKDFLLNVREDKLTITLTPSPLISKAFAFVNGIEILPVPKTIYFPGSKVPVPYLGHQQILLTNDEYALETLYRVGICGGENAFGMWSDDSRYISRPHVGGVLNIKNLAVSLNYTTLSSKDYNYSAPEEIYWTARTMGSDGDINMKNNLTWSFPVDSGFKYLVRLHFCEISIGVTQPNQRVFKVYINNQTAEERMDVVDSAGAPFTPLHKDYVVMVPTESGRRKDLWISLQPNLESKPKYADAILNGIEIMKISDSNHSLAAMFRLRSEQRNKKVQHVIIVVAATLGTIFGLVFTFFINIHRAGKKLKWRTSHILPSNSSSNHKNIQPTVTSGLCHQFTLEEISIATSNFSEDLVIGEGGFGKVYKGIMHHDGVTAVAVKRSNRRSGQGYKEFQTEINFFSFCHMNLVSLLGYCQEGNELILVYEYMAEGNVRPECLRAFVDLGIHCLADRTADRPTMGEVLNTLERILYLQDSLEEQERHTISTSSL 1382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g04085 1382 Pfam Malectin-like domain 816 1147 IPR024788 -
Vimu7g04085 1382 Pfam Malectin-like domain 37 414 IPR024788 -
Vimu7g04085 1382 FunFam FERONIA receptor-like kinase 961 1148 - -
Vimu7g04085 1382 SUPERFAMILY Protein kinase-like (PK-like) 508 702 IPR011009 -
Vimu7g04085 1382 FunFam FERONIA receptor-like kinase 224 416 - -
Vimu7g04085 1382 Gene3D - 35 196 - -
Vimu7g04085 1382 Gene3D - 224 416 - -
Vimu7g04085 1382 Gene3D - 775 933 - -
Vimu7g04085 1382 Gene3D - 962 1148 - -
Vimu7g04085 1382 FunFam FERONIA receptor-like kinase 772 934 - -
Vimu7g04085 1382 Pfam Protein tyrosine and serine/threonine kinase 525 601 IPR001245 GO:0004672|GO:0006468
Vimu7g04085 1382 Pfam Protein tyrosine and serine/threonine kinase 1249 1327 IPR001245 GO:0004672|GO:0006468
Vimu7g04085 1382 SUPERFAMILY Protein kinase-like (PK-like) 1215 1326 IPR011009 -
Vimu7g04085 1382 FunFam FERONIA receptor-like kinase 34 196 - -
Vimu7g04085 1382 Gene3D Phosphorylase Kinase; domain 1 505 591 - -
Vimu7g04085 1382 Gene3D Transferase(Phosphotransferase) domain 1 592 722 - -
Vimu7g04085 1382 ProSiteProfiles Protein kinase domain profile. 520 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu7g04085 1382 ProSiteProfiles Protein kinase domain profile. 1244 1382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu7g04085 1382 ProSitePatterns Protein kinases ATP-binding region signature. 1250 1274 IPR017441 GO:0005524
Vimu7g04085 1382 FunFam receptor-like protein kinase FERONIA 1207 1320 - -
Vimu7g04085 1382 FunFam receptor-like protein kinase FERONIA 487 596 - -
Vimu7g04085 1382 Gene3D Phosphorylase Kinase; domain 1 1206 1320 - -
Vimu7g04085 1382 PANTHER OS03G0124300 PROTEIN-RELATED 10 472 IPR046957 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g04085 Vimu-Chr7 39102381 39108698 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g04085 601 724 Receptor kinase-like Gene Family AT3G51550 44.000 2.94e-27 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Vimu7g04085 Malectin_like 3.2e-33 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g04085 - - gmx:100776859 876.315