Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g04066 ATGTTTGCACGAAGGGATGCAGAAGAAATGTTTAAACTAGGAAACATCAAAGGGGCCATCACTTGTGCTACCATGGCCAAAACACTAGATCCAAAAGTTGATGGCATTGACGAAACAATCTTAGCATACAAGATCCACCAGGCAGCAATGAGAAAAGATGACAATGGTGTAACAAATTGGTACAAAGTTCTTGGCATTAAGAAGGGCTTTGAGGATGACATTGAAAGCATCAAGATGCAACACAACAAATTAGTAATCATGCTGAATCCATCCAAGAACGCTTCAGTCGCAACTTGGAGTGCTTTTAGACTCATTTACAATGCCTGGAGACACCTAAGTGACTCAAATTATAAAAATGTGAATTTAAGAAGAAAGACGACTCCTTATCGCAACAAAGTTACCAAAAGTGCATGTTTACGATGTAAAAAATGGTGCAAATACGAAGTTCCTAAGATTTCAGGTGCACACAAACATGGAGAACGCACTAAAAGAGTTTTATTAATTGAGTGCTCGTGTTGTAAATGTAAATTTGATCCAATATCTAGACAGATTCCAAAGTCTAAGCTTCCCCACCTACAAAAACTTGCTTAA 591 0.379 MFARRDAEEMFKLGNIKGAITCATMAKTLDPKVDGIDETILAYKIHQAAMRKDDNGVTNWYKVLGIKKGFEDDIESIKMQHNKLVIMLNPSKNASVATWSAFRLIYNAWRHLSDSNYKNVNLRRKTTPYRNKVTKSACLRCKKWCKYEVPKISGAHKHGERTKRVLLIECSCCKCKFDPISRQIPKSKLPHLQKLA 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g04066 196 SUPERFAMILY Chaperone J-domain 58 119 IPR036869 -
Vimu7g04066 196 ProSiteProfiles dnaJ domain profile. 59 130 IPR001623 -
Vimu7g04066 196 Gene3D DnaJ domain 38 120 IPR036869 -
Vimu7g04066 196 PANTHER BNAC03G44070D PROTEIN 5 147 - -
Vimu7g04066 196 Pfam DnaJ domain 59 117 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g04066 Vimu-Chr7 38735852 38736442 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g04066 7 113 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 28.182 6.91e-09 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g04066 - - qsa:O6P43_028986 143.28