Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g04027 ATGATGGAGAACTTTGTTAGCAATCCTCTTAAACAAGGAAAGGAAAATCGTAAACTACTTAAATTTAACAAGGTTTTTTGGTCAAGCAATAAGTCAAGGTATTGTATTTTTTTTTATTTGTATTTCACATTATTATTACTTGATTGTAACGTTCAACTAACTCATCAAATATTTTTTTGTAGAGGAAGTATTAAGGACACTCAACCATTAATTCAATCTCTTCTTAATGGGTACAATGTTTATATATTTGCCTATGGTCAAACTGGTTCCGGAAAAACATATACAATGTTAAGAATTAAATTTGTTTAA 309 0.2751 MMENFVSNPLKQGKENRKLLKFNKVFWSSNKSRYCIFFYLYFTLLLLDCNVQLTHQIFFCRGSIKDTQPLIQSLLNGYNVYIFAYGQTGSGKTYTMLRIKFV 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g04027 102 Gene3D Kinesin motor domain 3 100 IPR036961 -
Vimu7g04027 102 ProSiteProfiles Kinesin motor domain profile. 1 102 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu7g04027 102 Pfam Kinesin motor domain 67 97 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu7g04027 102 PANTHER KINESIN-LIKE PROTEIN KLP-3 6 96 IPR027640 GO:0003777|GO:0007018
Vimu7g04027 102 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 67 99 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g04027 Vimu-Chr7 38135280 38137608 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g04027 56 96 Calmodulin-binding Proteins AT5G65930 55.556 8.74e-10 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g04027 K10406 - gmx:100812813 85.5001