Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g04014 TTGTCTTTGCACATGATGTTTCTTCTTCTTGTGAGCCTTGTTGTTTTGCAAGGCTTTGTGATACCAACCTGCTATTGCCAGATCAATACTCCTCAGAATATTGAAACATTTTATCCAATCCAAACTTCGGAACCACCCCTCCCAATCCAACCTTTTCAGCCACAGGCATCACCACCATCATCAGGACCAGTGGCTGCAACAAAAGCCTCTTCATCAAACAGTAAGGTAGCAACAGCAGTAGCTGCAACTGCAGCAAGCACTCTTGTTGTTTCTGGTTTGCTTTTCTTCTTTGTTAGAAGGTTCTCCAGAACAAGGAAGAGAAAGGAGACAAGAAAAAACACTGCTTCTGCTGCAGAAAGGCATGTTGCACCTCAGGTGGAGGTGTTTGAGAGAATGGAAGGAAACGTGAAGGGACTGATCGTTGATGAGGATGGTTTGGATGTGATTTATTGGAGAAAGCTTCAAGGTAAAAAGATACCACAAAAGGATTTTCAAAGGGAGGTGTTGGATAGTCCCAAAGATGAAGAAGGTGATCATGAGGGAAATCCAGGGAAGATAACTGAATCCATTCAAGAAACTCCTCTTCTTAGAGAGAAATCTTCAACTTCCCACATGAACATATTTCTTCCAGAAGAGTCCTACACAATCATGAGAATTCCACCTCCTGCTCCTCCTCCTACTGTTCCTTCATCGGTTGGAAGCTCTCCTACACAGCCATCTTCTCTTTCCTTTACCCCTTCATCACCAAAACCAATCTCCACTTTTTTCTCATCAATTCCAAACATTACAAATTCTGCAACACCATTGGCCCCTCCAAAAGTACCTGATGAAAAGAATGAAGCTCCGATACCAGCATCAGCACCACCACCTCCTCCACCAATCATAGATGAAAAGAAGTCACCACAACCACCTCCTCCTCCTCCTCCAATCCCTCCTAGAAAGAGTCCAGCACCACCACCTCCTCCACCAAAGGCAAGTGGTTTGAAGTCATCATCAAAACCGCCACCTCATCCTATTGAAAGAGCAGCAGGTACCACAAGTAAGCAAGGAGACACTTCACCTGAGGTTAAACTTAAGCCACTACATTGGGATAAGGTGAATACCAACCTTGATCACTCTATGGTGTGGGACAAAATGGACCGTGGTTCTTTCAGGGTTGATGATGATCTTATGGAAGCTCTCTTTGGGGTAGTCGCCACCAACCGAAATGGTAATGCCCCCAAAGAAAATAACTCAACGAGTTCTAGCAGGGATGCTTTGGCTCCATCATCAAATGCCTTCCTTCTTGACCCAAGAAAATCACAAAACATTGCTATTGTTTTGAAATCTTTGACAGTCTCTCGTAAAGATATTATTGAAGCACTCATTGATGGTCATGGCCTTAATATAGAAACCATTGAAAAGCTTGGTAGAGTAGCCCCAACAGAAGAAGAGCAATCACTTGTACTTGCATATGAAGGAGACCCTTCAAAACTTGCTGAAGCCGAAACTTTCCTACGCCACATCCTCAAAGCTGTTCCTTCAGCTTTTAAGCGATTGAATGCCTTGCTATTCAGGTTGAATTATGACTCCGAGATTCTAGAAATCAAGGAGTTTCTGCAGACCCTTGAGATGGGGTGCAAGGAGCTTCGAAAACAAGGAATCTTTGTCAAACTTCTTGAAGCTGTGCTTAAGGCTGGGAATCGCATGAATGCAGGCACTCAGAGGGGTAATGCTCAAGCTTTCAACTTGGCTTCTCTAAGAAAGCTCTCTGATGTCAAGAGCACTGATGGAAAAACCACATTGCTTCACTTTGTGGTTGAAGAAGTTGTTCGTTCTGAAGGAAAACGTGCTGTTCTCAACCGCAACCACAGTTTGAGCCGTAGTAGCAGCAGGAACAGAAACAAGAGTGATGACTCTCAAAACTCTTCTGCTTCAAATGAACAAAGACAAAAGGAATATATAACACTGGGATTGCCAGTTGTGGGAGGGATAAGTTCTGAGTTTTCTAACGTGAGGAAAGCTGCGGTTACAGATTACAGCACTTTTGTTGGTTCAATCTCAGCACTCTCGGCCAGGATTCTTGAGATTAGAGAACTTGTTTCCCAGTGTGGAAATGACAAGGGAGGGAACTTTGTGAGAGAAATGAACCGTTTTCTTGAAAATGCTGAGGAAGAATTGAGATTAGTGAGGGAAGAGCAAACAAGGGTGATGCAAATTGTGAAAAAAACAACAGATTATTATCAAGGAGGAGCTTCAAAAGATATTGTAGAGAACCCTCTTTATCTTTTTGTCATAGTAAAGGATTTTCTGGGAATGGTTGATCAAGCATGCATTGAGATTGCTCGTAACATGCAGAAGAGGAAGTCACCTAAG 2355 0.4314 MSLHMMFLLLVSLVVLQGFVIPTCYCQINTPQNIETFYPIQTSEPPLPIQPFQPQASPPSSGPVAATKASSSNSKVATAVAATAASTLVVSGLLFFFVRRFSRTRKRKETRKNTASAAERHVAPQVEVFERMEGNVKGLIVDEDGLDVIYWRKLQGKKIPQKDFQREVLDSPKDEEGDHEGNPGKITESIQETPLLREKSSTSHMNIFLPEESYTIMRIPPPAPPPTVPSSVGSSPTQPSSLSFTPSSPKPISTFFSSIPNITNSATPLAPPKVPDEKNEAPIPASAPPPPPPIIDEKKSPQPPPPPPPIPPRKSPAPPPPPPKASGLKSSSKPPPHPIERAAGTTSKQGDTSPEVKLKPLHWDKVNTNLDHSMVWDKMDRGSFRVDDDLMEALFGVVATNRNGNAPKENNSTSSSRDALAPSSNAFLLDPRKSQNIAIVLKSLTVSRKDIIEALIDGHGLNIETIEKLGRVAPTEEEQSLVLAYEGDPSKLAEAETFLRHILKAVPSAFKRLNALLFRLNYDSEILEIKEFLQTLEMGCKELRKQGIFVKLLEAVLKAGNRMNAGTQRGNAQAFNLASLRKLSDVKSTDGKTTLLHFVVEEVVRSEGKRAVLNRNHSLSRSSSRNRNKSDDSQNSSASNEQRQKEYITLGLPVVGGISSEFSNVRKAAVTDYSTFVGSISALSARILEIRELVSQCGNDKGGNFVREMNRFLENAEEELRLVREEQTRVMQIVKKTTDYYQGGASKDIVENPLYLFVIVKDFLGMVDQACIEIARNMQKRKSPK 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g04014 785 MobiDBLite consensus disorder prediction 163 185 - -
Vimu7g04014 785 MobiDBLite consensus disorder prediction 216 248 - -
Vimu7g04014 785 MobiDBLite consensus disorder prediction 275 329 - -
Vimu7g04014 785 MobiDBLite consensus disorder prediction 615 643 - -
Vimu7g04014 785 Pfam Formin Homology 2 Domain 352 767 IPR015425 -
Vimu7g04014 785 MobiDBLite consensus disorder prediction 48 68 - -
Vimu7g04014 785 PANTHER FORMIN-RELATED 43 778 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Vimu7g04014 785 SMART it6_source 348 782 IPR015425 -
Vimu7g04014 785 MobiDBLite consensus disorder prediction 401 420 - -
Vimu7g04014 785 MobiDBLite consensus disorder prediction 263 360 - -
Vimu7g04014 785 SUPERFAMILY Formin homology 2 domain (FH2 domain) 426 782 - -
Vimu7g04014 785 Gene3D Formin, FH2 domain 368 785 IPR042201 -
Vimu7g04014 785 MobiDBLite consensus disorder prediction 217 232 - -
Vimu7g04014 785 MobiDBLite consensus disorder prediction 163 204 - -
Vimu7g04014 785 MobiDBLite consensus disorder prediction 233 248 - -
Vimu7g04014 785 MobiDBLite consensus disorder prediction 614 643 - -
Vimu7g04014 785 ProSiteProfiles Formin homology-2 (FH2) domain profile. 348 785 IPR015425 -
Vimu7g04014 785 Coils Coil 706 733 - -
Vimu7g04014 785 MobiDBLite consensus disorder prediction 186 204 - -
Vimu7g04014 785 MobiDBLite consensus disorder prediction 403 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g04014 Vimu-Chr7 37920963 37923401 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g04014 2 782 FH2 protein (formin) Gene Family AT1G70140 43.860 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g04014 - - gmx:100778804 1035.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g04014 7 37920963 37923401 Vimu7g04014 7 37920963 37923401 ECH
Vimu7g04014 7 37920963 37923401 Vimu11g02535 11 44721879 44724311 PCT