Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03985 ATGCGTATACATGTGCATGCAGGACCCACCTTCGTCTTTCACCCTTCTTCATTCTCCAGCATACAACTCAACTCACTTTACTTCAACCACAACCACAACCTCAGCTTTGACTCTTCAACGTCTTCACTTTCCGATCCAATGCCGCCGGAAAGTCACGTCACCATCTCCTCTTACCGCCTCTGCTGGGACGTCTTTCTCAGCTTCCGGGGCACCCACACGGGCCACACCTTCACCATGCGCCTCTACCATGCTCTCCACGGTCGTGGCGTTCGCGTCTTCCGAAACGACGATGGGTTGGAGCGCCGCGCCGAGATCCAGAAGAAGCTTCTAGAAGCCGTGGAAGACTCTGCCGCCGCCGTCGTCGTTATCTCTCCCGATTACGCGTCCTCGCACTGGTGCCTGGAAGAGCTCGCAAAGATTTGCGAGGTTGGGAGGCTGATCCTCCCGGTTTTCTACTGGGTGAACCCTTCGCACGTGCGAAAGCAAGAGGGTCCCTTCGAAGAGTGGTTCGTGTGGCATGCACAGAGGTTTCCGAAAGAGAGGGTTGAGCAGTGGAGGAATGCGATGAAGAAAGTGGGTGGACTCGCTGGTTTTGTTTTGGATGAGAAAAGTGACAAGAGTGATGAACTGATTCAGATTTTGGTGCAAAATCTTATGAAGCAGCTGAGGAACACACCACTGAGTGTGGCTCCATTCACAGTAGGTGTCGATGATAGAGTTGAAGTGTTGAAAAACTTGTTAGACTTAAAATCCAACGATGTAAGGGTTTTGGGGTTGTATGGAATGGGTGGAGTTGGTAAGACTACATTGGCCAAGAGCCTCTTCAACAACCTTGTTGTTCATAATTTTGAGCGACGGAGTTTCATTCCAAATGTCAGATCACAGGTCTCCAAACACCACGGTTTGGTTTCTCTTCAAAACAAAATCCGTGGTGATCTTTGTGGTAGAAAAGAGGATCTGATCAACGATATCAGCGACGGCATTTCTGCTATACAAAAAATAGTGCAAGAGAATCGAGTTTTGTTGATCCTAGATGACGTTGACGATGTGGAGCAGCTTAACTTTTTGATGGGTAAGAGGGAATGGTTTTACAAGGGAAGTCGTGTTGTGATAACCACAAGGGATAAGGAAATTTTGCACGGGAGTTATGTTGATGTTGATTTTGAGGTGAAGGAATTGGAATTCTCTGAAGCAATGGAACTGTTCTGCTTCCATGCAATCAGAAGAAAGGAACCTGCAGAGGGTTTTTTAGATGTTTCAAAGCAAATTGTGGAGAAGACAGGAGGATTGCCTTTGGCTTTGGAAGTTTTTGGGTCTTTTCTGTTTGATAAAAGGACCGAGAGGGAATGGAAAGATGCTTTGGAGAAGCTGAAGCAGATTCGTCCTCCATGTCTTCAAGAAGTGCTGAAAATAAGTTTTGATGCTTTGGATGAACAAGAACAGTGTATATTCCTTGACATAGCTTGTTTGTTTGTGCAAATGGAAATGAAGAGAGATGATGTGGTTGACATATTGAATGGATGTGATTTTAGAGGAGAGATTGCGGTGGCTGTGCTCTCTGCAAGATGTCTAATTAAGATCATTGGTGATGGAAAAGTGTGGATGCATGATCAAGTTAGAGACATGGGAAGGCAAATTGTTCGTAGTGAAAGCCTTACAGATCCTGGTCTACGAAGCAGGCTCTGGGATCGTGATGAAATCTTGACTGTGTTGAAGAATATGAAGGGAACGAGAAATGTTCAAGGAATTGTCCTAGATTGTGTGAAGAGAAGAATGTCCATTCCCAGAGATCGCTCAGCAGATGAAATAACTAGGGAAAATTTTCGACGCAAGCCCAGTTGCAAATCTGCATTCGAGTATATTAAAGAGAGGTATAAAAAGTACGTAGAGGATAGAAAAGAGAAAGCAAAAGAGGTTATCCTTCAGCCCAAGCACTTTCAACCAATGGTTTCCTTAAGAATGCTTCAGATTAATTATTCCAGATTGGAAGGACAATTTATATGTCTTCCCCCAAAAATCAAGTGGTTACAATGGAAACAGTGTCCATTAAGTTATATGCCTTCTAGCTATAATCCATTGGAACTTGCAGTCATGGATCTCTCTGAAAGTCTGATTGAAACCTTGTGGAAGGGACGCAGTAACAAGGTGGCTGTGCACTTGATGGTTTTAAACCTCTCCAGGTGCCACCGTTTGACAGGAACTCCTGACTTATCTGGGTATCTGTCTCTTAAAAAACTTAATTTGGAAGAATGTTCTCACTTAACTAGGATTCATGAATCATTAGGGAATCTAAATTCCTTAGTTCATCTTAACTTGCGCCTCTGCTATAACCTCATAGAACTACCTGGTGATGTCTCTGGACTGAAACACCTCGAGGACCTCGTTCTTTCTGACTGCTGGAAATTGAAAGCATTACCAAAGGACTTGAGCTGCATGGTTTCTTTAAGACGGCTACTTCTTGATAGCACTTCTATAACTGAGCTTCCTGTGTCCATCTTCCATCTCACAAAACTTGAAAAGCTGAGTGCAAATGGATGCCACCTTCTGAAGAGGTTACCTACCTGCACTGGGAAACTCTGCTCCCTGCAAGAATTATCACTCAACCATACAGCATTGCAGGAATTGCCAGATTCAGTTGGTTCTTTGGAAAAACTTGAGATGCTTAGTTTGATGGGGTGTAAGTCACTATCAGTGATTCCTAACTCTACTGGGAAACTGATTTCCTTGACTCGATTGTATTTGGACGGCAGTGGAATCAAAGAATTGCCTGCTTCTATTGGTGCTTTATCATATTTAAGGAAGCTGTCTGTTGGAGACTGTACTTCTCTTTACAAATTTCCTGTCTCAATGGAGGCATTAGTTTCAATTGTTGAACTTAAGTTAGATGGCACAAAAGTTTCCAATTTTCCAGAAGAAATATTTGTGGGCATGAAAATGCTAGAAAAACTCGAGATGGGAAAAGTTCAGCATCTAAAATTCGTACCAGTATCATTTGGCTGCCTGTCAGCTCTTACCATTTTGGACATGCATGATGCAAACATTACTGAATTGCCAGAATCAATAGGAATGTTGGAAAATCTTATTCGGCTGAGGTTAGACAAGTGCAAACAGCTCCAAAGGCTTCCAGACTCCATTGGAAATTTGAAATCTTTGCGATGGCTAATGATGAAGGAAACAGCACTTACACGATTACCAGAAAGCTTTGGGATGCTCAGAAGCCTGGTAGAACTAGACATGAAAAGACTGCCCTATCTTAATGGGGCAGGAAACAACGTGTCTACAGGGACAATTATTCCTGAAATACGAGAACAGCCTAGTTCAGAGGCAATATTAACTTCCTTTTGCAATCTAAGCTTGCTGGAAAAGCTAAATGCTCATGGATGGGGAATATATGGAAAAATTCCAGATGAGTTTGAAAAGCTATCATCACTAGAAACTTTAAGTTTAGGTCACAACAATATTTGCAGTCTTCCAGCCAGCATGACGGGTCTCTCCTATCTCAAAAAGCTTTTGTTATCAGATTGCAGGGAGCTCATGTTTGTGCCTCCTCTTCCCTCTAGCCTAGAAGAGCTAAATCTGGAAAACTGTGTTGCAGTGCAGTACATACATGATATTTCAAACTTGGAGCGATTAGAGGAGTTCAACCTTACAAATTGTGAAAAGGTGGTGGATGTCCCAGGTCTTGAACATTTGAAGTCCTTAAGAAGGTTGTACATGAGTGGTTGCATTGGATGCTCCCTTGCAGTAAAGAGAAGATTTTCCAAGGTTCTACTTAAAAAATTAGAGATTTTGATTATTCCTGGAAGCAGGGTCCCGGATTGGTTTACAGCAGAACCAGTAGTTTTTTCCAAGAGAAGCAATAGGGAGCTCAAAGGTGTTATTTTTTTTGGCGTTATCTCTTTCAAGAACATAGCTGAAAACCAAAGGGAAGGACTGGAGTTAGTGGATGTTCAAGGAAAAATCTTTAATTTGACCAGTGAGGTGTTTAGCACAACGATTCGCCTGCTAAGAGTACCCAGGAGAAATGAAGACCACATATTTTTGCGCAGATTCGGTGCTCGAACTCCGTTAGTCTTTCAGTTAAAAGATAGGTATACCTTACATTTGCAAAGGCGAAACCCTCCTCGTATTGAGGGGTTGGAGCTCAATAACTGCAGAATTCATTTAGTTTTTTATGGTGATGATGATTATGAGGGAGACGAAGGATCACTTGAAGAAAGTCAATACTCTGTTTCACAAAAATTAGCCAAGTTCTTCAACTTTGATGCAGACGATCCAGACGTCTGA 4287 0.4271 MRIHVHAGPTFVFHPSSFSSIQLNSLYFNHNHNLSFDSSTSSLSDPMPPESHVTISSYRLCWDVFLSFRGTHTGHTFTMRLYHALHGRGVRVFRNDDGLERRAEIQKKLLEAVEDSAAAVVVISPDYASSHWCLEELAKICEVGRLILPVFYWVNPSHVRKQEGPFEEWFVWHAQRFPKERVEQWRNAMKKVGGLAGFVLDEKSDKSDELIQILVQNLMKQLRNTPLSVAPFTVGVDDRVEVLKNLLDLKSNDVRVLGLYGMGGVGKTTLAKSLFNNLVVHNFERRSFIPNVRSQVSKHHGLVSLQNKIRGDLCGRKEDLINDISDGISAIQKIVQENRVLLILDDVDDVEQLNFLMGKREWFYKGSRVVITTRDKEILHGSYVDVDFEVKELEFSEAMELFCFHAIRRKEPAEGFLDVSKQIVEKTGGLPLALEVFGSFLFDKRTEREWKDALEKLKQIRPPCLQEVLKISFDALDEQEQCIFLDIACLFVQMEMKRDDVVDILNGCDFRGEIAVAVLSARCLIKIIGDGKVWMHDQVRDMGRQIVRSESLTDPGLRSRLWDRDEILTVLKNMKGTRNVQGIVLDCVKRRMSIPRDRSADEITRENFRRKPSCKSAFEYIKERYKKYVEDRKEKAKEVILQPKHFQPMVSLRMLQINYSRLEGQFICLPPKIKWLQWKQCPLSYMPSSYNPLELAVMDLSESLIETLWKGRSNKVAVHLMVLNLSRCHRLTGTPDLSGYLSLKKLNLEECSHLTRIHESLGNLNSLVHLNLRLCYNLIELPGDVSGLKHLEDLVLSDCWKLKALPKDLSCMVSLRRLLLDSTSITELPVSIFHLTKLEKLSANGCHLLKRLPTCTGKLCSLQELSLNHTALQELPDSVGSLEKLEMLSLMGCKSLSVIPNSTGKLISLTRLYLDGSGIKELPASIGALSYLRKLSVGDCTSLYKFPVSMEALVSIVELKLDGTKVSNFPEEIFVGMKMLEKLEMGKVQHLKFVPVSFGCLSALTILDMHDANITELPESIGMLENLIRLRLDKCKQLQRLPDSIGNLKSLRWLMMKETALTRLPESFGMLRSLVELDMKRLPYLNGAGNNVSTGTIIPEIREQPSSEAILTSFCNLSLLEKLNAHGWGIYGKIPDEFEKLSSLETLSLGHNNICSLPASMTGLSYLKKLLLSDCRELMFVPPLPSSLEELNLENCVAVQYIHDISNLERLEEFNLTNCEKVVDVPGLEHLKSLRRLYMSGCIGCSLAVKRRFSKVLLKKLEILIIPGSRVPDWFTAEPVVFSKRSNRELKGVIFFGVISFKNIAENQREGLELVDVQGKIFNLTSEVFSTTIRLLRVPRRNEDHIFLRRFGARTPLVFQLKDRYTLHLQRRNPPRIEGLELNNCRIHLVFYGDDDYEGDEGSLEESQYSVSQKLAKFFNFDADDPDV 1428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03985 1428 Gene3D - 28 193 IPR035897 -
Vimu7g03985 1428 ProSiteProfiles Leucine-rich repeat profile. 1143 1164 IPR001611 GO:0005515
Vimu7g03985 1428 ProSiteProfiles TIR domain profile. 60 222 IPR000157 GO:0007165
Vimu7g03985 1428 Pfam NB-ARC domain 239 459 IPR002182 GO:0043531
Vimu7g03985 1428 Pfam TIR domain 62 227 IPR000157 GO:0007165
Vimu7g03985 1428 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 223 487 IPR027417 -
Vimu7g03985 1428 SUPERFAMILY L domain-like 991 1268 - -
Vimu7g03985 1428 Gene3D - 213 386 IPR027417 -
Vimu7g03985 1428 PRINTS Disease resistance protein signature 334 348 - -
Vimu7g03985 1428 PRINTS Disease resistance protein signature 256 271 - -
Vimu7g03985 1428 PRINTS Disease resistance protein signature 427 441 - -
Vimu7g03985 1428 PRINTS Disease resistance protein signature 880 896 - -
Vimu7g03985 1428 SUPERFAMILY Toll/Interleukin receptor TIR domain 56 198 IPR035897 -
Vimu7g03985 1428 Gene3D Ribonuclease Inhibitor 1104 1313 IPR032675 -
Vimu7g03985 1428 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 63 868 IPR044974 GO:0006952
Vimu7g03985 1428 Gene3D - 393 477 IPR042197 -
Vimu7g03985 1428 SMART till_3 61 195 IPR000157 GO:0007165
Vimu7g03985 1428 SUPERFAMILY L domain-like 535 985 - -
Vimu7g03985 1428 Gene3D Ribonuclease Inhibitor 846 1103 IPR032675 -
Vimu7g03985 1428 Gene3D Ribonuclease Inhibitor 638 845 IPR032675 -
Vimu7g03985 1428 SMART LRR_typ_2 906 929 IPR003591 -
Vimu7g03985 1428 SMART LRR_typ_2 953 976 IPR003591 -
Vimu7g03985 1428 SMART LRR_typ_2 1001 1024 IPR003591 -
Vimu7g03985 1428 SMART LRR_typ_2 812 835 IPR003591 -
Vimu7g03985 1428 SMART LRR_typ_2 1141 1164 IPR003591 -
Vimu7g03985 1428 SMART LRR_typ_2 1048 1070 IPR003591 -
Vimu7g03985 1428 SMART LRR_typ_2 859 882 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03985 Vimu-Chr7 37593113 37598419 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03985 62 935 WRKY Transcription Factor Family AT4G12020 28.732 3.11e-78 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03985 - - gmx:100784137 2184.07