Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03969 ATGGCTAAAAACGAGTTGAAGCTTTTGGGTGGTTGGTCCAGCCCTTTTGCTCTAAGGGTGCAGATTGCCCTTCACCTGAAGGGTGTAGATTATGAGGTTATTGAAGAGACCTTTAATCCCAAAAGTGAACTTCTTCTTAAGTCGAATCCTGTGCACAAGAAAATCCCAGTTCTCCTTCATGCAGATAAAGCCATATGTGAATCTGCAATCATACTCGAATACATCGATGAAGTTTGGACCCATGCTCCTTCCATCCTTCCACAAAATGCCTATGATCGAGCTAATGCCAGATTTTGGGTTGCTTACATCGATGACAAGTGGTTTTCGGCCTTGAAAAGTATTCTAAATGCTGAAGAGAATGATGAAGCAAAGGAGGCACAGTTTGAGGAAGCAGAAGAAGTGTTTGAGAGGATGGAAGAAGTGATGAACAAGGGGAGTGAAGGAAAGGCCTTTTTCGGAGGAGACAGCATTGGATTCATTGATATTGGTTTTGGAAGCTATCTGAGTTGGATCAGAGTGGTGGAGAAGATGAATGCAAGAAAATTGATTGATGAAATCAAGCACCCTGGCTTGTTCCAATGGACTGAAAATTTTGCTGCTCATCCTGCTGTCAATGGCCTTATACCAGACACTGACAAACTTATTGAAGTTGCCAAGGCTTTTAAGCAAACATTAAGGGCTCGTGCAGCTGCAAACTAA 699 0.4263 MAKNELKLLGGWSSPFALRVQIALHLKGVDYEVIEETFNPKSELLLKSNPVHKKIPVLLHADKAICESAIILEYIDEVWTHAPSILPQNAYDRANARFWVAYIDDKWFSALKSILNAEENDEAKEAQFEEAEEVFERMEEVMNKGSEGKAFFGGDSIGFIDIGFGSYLSWIRVVEKMNARKLIDEIKHPGLFQWTENFAAHPAVNGLIPDTDKLIEVAKAFKQTLRARAAAN 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03969 232 SFLD Main.3: Omega- and Tau-like 2 229 IPR045073 -
Vimu7g03969 232 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Vimu7g03969 232 SUPERFAMILY Thioredoxin-like 5 108 IPR036249 -
Vimu7g03969 232 FunFam Glutathione S-transferase GSTU6 1 86 - -
Vimu7g03969 232 Pfam Glutathione S-transferase, C-terminal domain 101 202 IPR004046 -
Vimu7g03969 232 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 9 215 IPR045073 -
Vimu7g03969 232 SFLD Glutathione Transferase (cytosolic) 2 229 IPR040079 -
Vimu7g03969 232 FunFam Glutathione S-transferase U9 86 228 - -
Vimu7g03969 232 Gene3D Glutaredoxin 1 85 - -
Vimu7g03969 232 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 221 IPR010987 -
Vimu7g03969 232 CDD GST_N_Tau 6 79 - -
Vimu7g03969 232 SUPERFAMILY GST C-terminal domain-like 77 223 IPR036282 -
Vimu7g03969 232 Coils Coil 114 134 - -
Vimu7g03969 232 Gene3D - 86 230 - -
Vimu7g03969 232 CDD GST_C_Tau 90 221 IPR045074 GO:0004364|GO:0006749
Vimu7g03969 232 Pfam Glutathione S-transferase, N-terminal domain 5 77 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03969 Vimu-Chr7 37418542 37419389 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03969 1 219 Glutathione S-transferase Gene Family AT1G10360 53.182 5.93e-83 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03969 K00799 - gmx:547576 320.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03969 7 37418542 37419389 Vimu7g03969 7 37418542 37419389 PCT
Vimu7g03969 7 37418542 37419389 Vimu7g03972 7 37467123 37467966 PCT