Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03966 TTGCTGCGTACTATACCACAAATCTGTTATCTCTACCTCGCTTCCTCCACCATTCATATAAACACTTCATTCCCTAGCAAATATCTCAACACAACAAACACATTCCACTGCTGCATAGTGATGGCTAAAGACGAGTTGAAGCTTTTGGGTGGGTGGTTCAGCCCTTATGCCCTAAGGGTGCAGATCGCCCTTAACCTGAAGGGTGTAGATTACGAGGTTATTGAAGAGACCTTGAATCCCAAAAGTGAACTTCTTCTTAAGTCGAATCCTGTGCACAAGAAAATCCCAGTTCTCCTTCATGCAGATAAAGCCATATGTGAATCTGCAATCATAGTCGAATACATCGATGAAGTTTGGACCCATGCTCCTTCCATCCTTCCACAGAATGCCTATGATCGAGCTAATGCCAGATTTTGGGTTGCTTACATCGATGACAAGTGGCTTTCGTCCTTGAGAAGTATTCTGATAGCTGAAGATGATGAGGCAAAAAAGCCACACTTTGAGCAAGTAGAGGAAGCAGTTGAGAGGTTGGAAGAAGTGCTAAAGAAGAGCAGTAGTGAAGGGAAAGCATTTTTTGGAGGAGATACGATTGGATTCATTGATATTGGTTTTGGTAGCTTTCTGAGTTGGACGAGAGTGATAGAGAAGATAAATGGAAGAAAATTCCTGGATGAAACCAAGCACCCAAGTTTGGTCCAGTGGGCTGAAACATTTGCTGTTCATCCTGCTGTCAATGGCCTTCTACCAGAAATTGACAATCTTATTGAATTTTCCAAGATTTTAAAGCTAAAGTTAGCTGCTGCAAAGTAA 810 0.421 MLRTIPQICYLYLASSTIHINTSFPSKYLNTTNTFHCCIVMAKDELKLLGGWFSPYALRVQIALNLKGVDYEVIEETLNPKSELLLKSNPVHKKIPVLLHADKAICESAIIVEYIDEVWTHAPSILPQNAYDRANARFWVAYIDDKWLSSLRSILIAEDDEAKKPHFEQVEEAVERLEEVLKKSSSEGKAFFGGDTIGFIDIGFGSFLSWTRVIEKINGRKFLDETKHPSLVQWAETFAVHPAVNGLLPEIDNLIEFSKILKLKLAAAK 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03966 269 FunFam Glutathione S-transferase GSTU6 41 126 - -
Vimu7g03966 269 Pfam Glutathione S-transferase, N-terminal domain 46 117 IPR004045 -
Vimu7g03966 269 SFLD Main (cytGST) 41 267 - -
Vimu7g03966 269 SUPERFAMILY GST C-terminal domain-like 117 260 IPR036282 -
Vimu7g03966 269 SFLD Main.3: Omega- and Tau-like 41 267 IPR045073 -
Vimu7g03966 269 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 129 263 IPR010987 -
Vimu7g03966 269 Coils Coil 167 187 - -
Vimu7g03966 269 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 44 123 IPR004045 -
Vimu7g03966 269 Pfam Glutathione S-transferase, C-terminal domain 162 236 - -
Vimu7g03966 269 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 49 252 IPR045073 -
Vimu7g03966 269 CDD GST_C_Tau 130 261 IPR045074 GO:0004364|GO:0006749
Vimu7g03966 269 Gene3D Glutaredoxin 32 125 - -
Vimu7g03966 269 CDD GST_N_Tau 46 119 - -
Vimu7g03966 269 Gene3D - 126 269 - -
Vimu7g03966 269 FunFam Glutathione S-transferase U9 126 268 - -
Vimu7g03966 269 SUPERFAMILY Thioredoxin-like 46 147 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03966 Vimu-Chr7 37402297 37403211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03966 41 261 Glutathione S-transferase Gene Family AT1G10360 58.108 1.12e-87 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03966 K00799 - gmx:547576 344.739