Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03923 ATGGGAACCTATGGCTATGCAGCACCAGAATATGTCATGACAGGTCATCTTACATCAAAAAGTGATGTGTACAGTTTTGGAGTGGTACTACTTGAGATGTTGACTGGGAGAAGATCCATGGACAAACACAGACCCAATGGTGAACATAACCTTGTGGAATGGGCTCGGCCGCATCTGGGAGAGAGGAGAAGGTTCTACAAGCTGATAGACCCTCGTTTGGAAGGGCACTTTTCGGTGAAAGGTGCTCAGAAAGCTGCCCAACTAGCTGCTCACTGCCTTTGTAGAGATCCAAAAGCAAGGCCTCTGATGAGTGAAGTTGTAGAAGCTTTGAAGCCTTTGCCAAACCTCAAGGACATGGCAAGCTCTTCATATTATTACCAGACGATGCAAGCCGACCGCATCGGAGCGAGCCCGAACACAAGAAACAGTCGAACACAAGGAGCATTGCTCAGCCGCAACGGACAGCAGCAAAGGAGTCTTTCTATACCAAATGGTAGCTATGCATCTCCTTATCACCATCAGTTTCCTCAACCATCCCCAAAGACCAATGGCAAAGCATAG 561 0.4795 MGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKHRPNGEHNLVEWARPHLGERRRFYKLIDPRLEGHFSVKGAQKAAQLAAHCLCRDPKARPLMSEVVEALKPLPNLKDMASSSYYYQTMQADRIGASPNTRNSRTQGALLSRNGQQQRSLSIPNGSYASPYHHQFPQPSPKTNGKA 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03923 186 Gene3D Transferase(Phosphotransferase) domain 1 1 133 - -
Vimu7g03923 186 MobiDBLite consensus disorder prediction 135 186 - -
Vimu7g03923 186 SUPERFAMILY Protein kinase-like (PK-like) 1 128 IPR011009 -
Vimu7g03923 186 ProSiteProfiles Protein kinase domain profile. 1 116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu7g03923 186 Pfam Protein kinase domain 2 108 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu7g03923 186 PANTHER OS01G0588500 PROTEIN-RELATED 1 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03923 Vimu-Chr7 36769929 36775001 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03923 1 127 Glycoside Hydrolase AT3G07070 55.118 5.23e-39 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Vimu7g03923 Pkinase 1.2e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03923 - - gmx:100305443 365.155