Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu7g03851 | ATGTTCTCTCGCTTTTTCGTGAAACCTCGAGATCTGCTCTGCCTCGGTTTTGATTTGGGTTTCGTTTTTCCAATGAGCGATCACTTGGTGCTGTTCGTTGACCGTCTCGCACGCCCTGTCCCCGTTGACCCGGTGGCACAGCCGGCGCAGCTTCCCTCCGAGCCCTCTCCGCCTCCGGCTGCCGCGGATGCCACCACAGCCGCCGCCGGGAGTTCGGGCACCGCTCCGGCGGAGGATCGCGTCGGGGAGGGAGGTGATGAGGAGGAGCCGCTGATCCAGATGGCGGAGTGCCGCATCTGCCAGGAAGAGGACGGCGTTTCCAATTTGGAAACGCCCTGCGCCTGTAGCGGCAGTCTTAAGTATGCTCACAGAAAGTGTGTTCAGCATTGGTGTGATGAGAAAGGAGACATTACTTGTGAGATATGTCATCAGCCTTATCAACCTGGGTACACTGCACCACCTCCTCGTCCTAACCCTGAAGAAACTACCATTGATATAGGAGGTGGATGGACAATATCTGGCACACCATTGGACTTGCGTGATCCTCGGCTCTTGGCAATTGCAGAGGCAGAACGTCAATTCTTGGATGCTGAATATGATGAGTATGCTGCTTCCAATGCCAGTGGGGCTGCATTCTGCCGCTCAGCTGCTTTAATTTTAATGGCTCTTCTACTCTTGCGGCATGCACTTTCTGTCTCGGATAGTGATTCTTCTGACGATGATCCATCCAATTTTTTCTCTCTTTTCTTGCTTCGAGCGGCTGGATTTTTATTACCTTGCTACATTATGGCCTGGGCAATCAGTATTCTGCAGCGTCGACGACAGAGACAAGAGGCTGCAGCACTAGCGGCAACCCAAGTTGCTTTTGTTCTGCAATCTGGGCAGCGTAGAGGTCTACAGTTCGCAATAGCACCAGGACCAGCCACAGTACACCAGGAACAAGTGTAA | 948 | 0.5327 | MFSRFFVKPRDLLCLGFDLGFVFPMSDHLVLFVDRLARPVPVDPVAQPAQLPSEPSPPPAAADATTAAAGSSGTAPAEDRVGEGGDEEEPLIQMAECRICQEEDGVSNLETPCACSGSLKYAHRKCVQHWCDEKGDITCEICHQPYQPGYTAPPPRPNPEETTIDIGGGWTISGTPLDLRDPRLLAIAEAERQFLDAEYDEYAASNASGAAFCRSAALILMALLLLRHALSVSDSDSSDDDPSNFFSLFLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATQVAFVLQSGQRRGLQFAIAPGPATVHQEQV | 315 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu7g03851 | 315 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 85 | 152 | IPR013083 | - | |
Vimu7g03851 | 315 | SMART | ringv_2 | 96 | 143 | IPR011016 | GO:0008270 | |
Vimu7g03851 | 315 | Pfam | RING-variant domain | 97 | 142 | IPR011016 | GO:0008270 | |
Vimu7g03851 | 315 | Pfam | Protein of unknown function (DUF3675) | 148 | 267 | IPR022143 | - | |
Vimu7g03851 | 315 | ProSiteProfiles | Zinc finger RING-CH-type profile. | 89 | 149 | IPR011016 | GO:0008270 | |
Vimu7g03851 | 315 | PANTHER | RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING | 25 | 277 | IPR033275 | - | |
Vimu7g03851 | 315 | FunFam | RING/FYVE/PHD zinc finger protein | 85 | 153 | - | - | |
Vimu7g03851 | 315 | SUPERFAMILY | RING/U-box | 95 | 147 | - | - | |
Vimu7g03851 | 315 | CDD | RING_CH-C4HC3_MARCH | 97 | 143 | - | - | |
Vimu7g03851 | 315 | Coils | Coil | 185 | 205 | - | - | |
Vimu7g03851 | 315 | MobiDBLite | consensus disorder prediction | 46 | 87 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu7g03851 | Vimu-Chr7 | 34964239 | 34968018 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu7g03851 | 96 | 172 | C3H Transcription Factor Family | AT2G37950 | 37.079 | 2.52e-08 | 51.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu7g03851 | - | - | gmx:100779674 | 451.825 |