Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03849 ATGTTGAATGTTGACGTGAATGGGAACAACAAAAGGAAGAGGTGTGGGAGGGTTTTCAGGTTCAAAAACTTTGCTGAACCTGGTTACCCTGTCATGTTTGGTGGGCCATTTCGTGAGAATGTGAATGCATTGCTTCAATATGCAAATTTGGAGAGTCATTTAAGCATGCCAATGTGGTCTTTTCAACTGGAAGTTCATCAGCAACCTCCTTTGCATATCTTACTGTTTGTGATTGAAGAGGCAACAGAAGCAGTGCTGAATCGTCATTGCAAGCATTGTCAATACGTTGGAAGTGTGAAGGGTGCTGTAGAGATAAGAATGGGTCATATGATGCATGGTGTTTTTCACTCTAATGGATTCGGCCATTTGCTATGTGTCAATGGATTGGAAATGGGTTCTAATTTGGCTGGAAACCAGATCATGGACTTTTGGAACCGTTTGTGCAAGGGATTGCAAGCAAGTCGTTGGGGTTACAAATTTGGCAGAGGAAGCTTTGGTGTAACTGAATCAATGTACCAGAAAGCCATAGAAGCAATAAGAAGCATGCCACTGTATTTGATCACACACCACATAACAAATTCCAACCACGCCATTCCACTCATATTCTCAAGATATCAAACACTTTCAGATCAGTCTCTTCTTACCCTCGGTGACCTCTTTTCTTACATGTTAGACCTGAAATCACGTCTTCCTCCAGAAACTTCCATTGCCTCTTACACCACAACTGCCTTGCTTGAGACCAATTGCCGTTGGTCCCCTAAGAGGATTGAGATGGCAACAAGGGTCATTGTTGAGGCCTTGAAAAAAACTGAGTTCAGATGGGTTTCAAGGCAACAAGTTAGAGATGCTGCTCGTGCATACATTGGAGACACAGGTCTGCTAGATTTTGTGTTGAAGTCCTTAGGAAACCATGTCGTGGGAAACTACTTGGTTCATAGAAGCTTGAACCCTGTCACCAAAGTCTTGGAATATTGCTTGGAAGACATTTCTAAGGTTTACCCTTGTAATGAAAGTCTGGTAATGAGCAACAAGTACAAGATCACACGAACTCAACTCATGAAAGACATGCTTTATCTGTATAAGTACATTCTCATAGACCCTAAACCTATCATGGGCTCAGAGTTTCTCTCAGCTATACCATTAGCAGCAAGGATAATTCTTGACACCAAGTATTTTATAAGAGATTACTGGGAAGATTTTTCTAAACAAGTTCACCTGGGTTCGGAAGAAAAGCTCAACCTTTACTGCACAATTTTGCTGAGGAATGATGGTGATGAATACCACCTAAACAAGGCCTTTATGCCACCCCATGAATGTTTCACAGTGAAAAGAAATGCTACTGTGAATGAGTTGAAGGTGGAGGTTGAAAGAAGGTTTAGAGAAATTTATTGGGGTTTGAGGAGTTTTGTGGTGGAATCAGTTGAGAATTTGAGTATGAATAATGGAAGTGAAATGGTTTTAGGTGTAACGAAAGTGGGTGAAAAGATGGTGTTTGAAGGTCGTTGTGACAGGAACATGAAAGAAAAGATTAATATTGAGGAAATGTGTGAAGGTGATCCAAATAGTGGTACTGTGGATTGTAGTTGTGGAACGATGGAAGATGATGGTGAAAGAATGCACTCTCTTTGCTATCGAACTCTATCAATCCTCTATCACATAGGGGTTAATTCTCTACTCACGCCTAACTTGAGCGTCGGAGCGCCTTTTCAGCTCGAAGAACACCGGACGGCTGAAGAAGATATCAACCGGACGGTCCTGAAGAAGAAGAAGCAGACGGAAGGGCAGAAAGCGACGTCCTTCATCGAAGAAAGGCGGAAAGAGGGTATTTCAAATACTATTACGAGATATTGCCATCTAACCAAAGACCGAACGGTTTTCAGTCATTCGGCCTCCCAAGTATCCAACCGTTCGGCCTCGCTACCATTCGGCCTCATAGATTTTGTCTACTGGGAAGTTCTCCAGGAACTCCTAGGTCACGGACAATCAATCACGTCTACTGGGAGGTTCTCTAGGAACTCCTGGGCCACGGACGGTCAATTTTGTCTACTGGGAAGTTCTCCAGGAACTCCTGGGTCACGGACAATCAATCACGTCTACTGGGAGGTTCTCCAGGAACTCCTGGGCCACGGACGGACAATTTTGTCTACTGGGAAGTTCTCCAGGAACTCCTGGGTCACGGACAATCGATCACGTCTACTGGGAGGTTCTACAGGAACTCCTGGGCCACGGACGGTCAATTTTGTCTACTGGGAAGTTCTCCAGGAACTCCTGGGTCACGGACAATCAATCATGTCTACTGGGAGGTTTTACAGGAACTCCTGGGCCACGGACGGTCAATTTTGTCTACTAGGAAGCTCTCCAAGAATTCTTGGGTCACGGACAATCTATCAAGTCTACTGGGAAGTTCTCCAGGAACTCTTGGGTCACGGACAGTTGATTACTATCAAAAAGCACGGACCATCGAGTCCGGGCGCTCACTTACTCCTGGGTCACGGACAGTTGATTACTATCAAAAAGCACGGACCATCGAGTCCGGGCGCTCACTTACTCCTGGGTCACGGACAGTTGATTGCTATCAAAAAGCACGGACCACCGAGTCCGGGCGCTCACTTACTAACAGAAGCACGTACTCCCTCCTCTCGGTCAGAGCTCGAAGAACACCGGACGACTGAAGAAGATATCAACCGGACGGTCCTGAAGAAGAAGAAGCAGACGGAAGGGCAGAAAGCGACGTGA 2736 0.4518 MLNVDVNGNNKRKRCGRVFRFKNFAEPGYPVMFGGPFRENVNALLQYANLESHLSMPMWSFQLEVHQQPPLHILLFVIEEATEAVLNRHCKHCQYVGSVKGAVEIRMGHMMHGVFHSNGFGHLLCVNGLEMGSNLAGNQIMDFWNRLCKGLQASRWGYKFGRGSFGVTESMYQKAIEAIRSMPLYLITHHITNSNHAIPLIFSRYQTLSDQSLLTLGDLFSYMLDLKSRLPPETSIASYTTTALLETNCRWSPKRIEMATRVIVEALKKTEFRWVSRQQVRDAARAYIGDTGLLDFVLKSLGNHVVGNYLVHRSLNPVTKVLEYCLEDISKVYPCNESLVMSNKYKITRTQLMKDMLYLYKYILIDPKPIMGSEFLSAIPLAARIILDTKYFIRDYWEDFSKQVHLGSEEKLNLYCTILLRNDGDEYHLNKAFMPPHECFTVKRNATVNELKVEVERRFREIYWGLRSFVVESVENLSMNNGSEMVLGVTKVGEKMVFEGRCDRNMKEKINIEEMCEGDPNSGTVDCSCGTMEDDGERMHSLCYRTLSILYHIGVNSLLTPNLSVGAPFQLEEHRTAEEDINRTVLKKKKQTEGQKATSFIEERRKEGISNTITRYCHLTKDRTVFSHSASQVSNRSASLPFGLIDFVYWEVLQELLGHGQSITSTGRFSRNSWATDGQFCLLGSSPGTPGSRTINHVYWEVLQELLGHGRTILSTGKFSRNSWVTDNRSRLLGGSTGTPGPRTVNFVYWEVLQELLGHGQSIMSTGRFYRNSWATDGQFCLLGSSPRILGSRTIYQVYWEVLQELLGHGQLITIKKHGPSSPGAHLLLGHGQLITIKKHGPSSPGAHLLLGHGQLIAIKKHGPPSPGAHLLTEARTPSSRSELEEHRTTEEDINRTVLKKKKQTEGQKAT 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03849 911 Coils Coil 900 911 - -
Vimu7g03849 911 MobiDBLite consensus disorder prediction 862 911 - -
Vimu7g03849 911 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 103 153 - -
Vimu7g03849 911 MobiDBLite consensus disorder prediction 879 911 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03849 Vimu-Chr7 34934606 34941509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03849 11 539 PHD Transcription Factor Family AT5G22260 44.122 1.07e-161 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03849 K26271 - gmx:100780210 836.254