Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03826 ATGTCGATAGTGAAACTCTCTCCTCCGATACACTCCCAATTTTCTTCCCACCACAATCCTCCGACAACCTCGGACCGCGGCATTGTATTCCACGAAAAGGTGCGCTACCTTAAAGCCCTCAAAGTGAATCCGGAGAAGGCCTTCCGCTTGAACCCCAAACTCCGCTCCTCCCCTCTCGCCGCCCTGGAATCCGTCACGCGCTGTCTCTACTCCCTCGGAGTCCCACGCGCCTCCTTGGGGCGCATCCTCGACATGCATCCCGTGCTCCTCACCTGCAACCCCTACTACCAACTGTATCCCCTCCTCGACTTCCTCCTCCACGAGGTCGCAATCCCCTTCCCCGACGTCCACCTCTGCATTATCCGCTGCCCCAGATTGCTCGTTTCCAGCATTGATAATCAATTGCGTCCCACACTGTTCTTTCTCAGGGAATTAGGGTTCTGTGGGCCACACTCCCTCACGTGCCAGACCACCCTGCTTCTCGTGTCCAGCTTGGAGGACACCCTTTTGCCCAAGATTGAGTTTTTGAAGAGTTTGGGGTTCACCCACATCGAGGTTTCCAACATGGTCGTCAGGTCCCCTGGGTTATTGACTTTAAGCGTGAAGAAGAATTTGGTACCCAAAGTGGAATTTTTCTTGAAGGAGATGAATGGGGATGTTTCTGAGCTCAAGAGGTTTCCTCAGTACTTTTCTTTTAGCTTGGAACGGAGGATTGGGCCGAGATTTGGGATGCTGAGGCAGCTTGGCGTGTCCATGCCGTTGGAAGATATGTTGAAGGTTAGTGATGGCGAGTTTAATGCTAGGTTGCTTGAATTGAGGTTTAAGACTCTTGAGTTTGGAGTAGGATAA 849 0.5218 MSIVKLSPPIHSQFSSHHNPPTTSDRGIVFHEKVRYLKALKVNPEKAFRLNPKLRSSPLAALESVTRCLYSLGVPRASLGRILDMHPVLLTCNPYYQLYPLLDFLLHEVAIPFPDVHLCIIRCPRLLVSSIDNQLRPTLFFLRELGFCGPHSLTCQTTLLLVSSLEDTLLPKIEFLKSLGFTHIEVSNMVVRSPGLLTLSVKKNLVPKVEFFLKEMNGDVSELKRFPQYFSFSLERRIGPRFGMLRQLGVSMPLEDMLKVSDGEFNARLLELRFKTLEFGVG 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03826 282 PANTHER CGI-12 PROTEIN-RELATED 50 270 IPR003690 GO:0003690|GO:0006355
Vimu7g03826 282 SMART mt_12 117 148 IPR003690 GO:0003690|GO:0006355
Vimu7g03826 282 SMART mt_12 80 112 IPR003690 GO:0003690|GO:0006355
Vimu7g03826 282 SMART mt_12 220 251 IPR003690 GO:0003690|GO:0006355
Vimu7g03826 282 SMART mt_12 151 182 IPR003690 GO:0003690|GO:0006355
Vimu7g03826 282 SMART mt_12 45 75 IPR003690 GO:0003690|GO:0006355
Vimu7g03826 282 SMART mt_12 187 219 IPR003690 GO:0003690|GO:0006355
Vimu7g03826 282 MobiDBLite consensus disorder prediction 1 23 - -
Vimu7g03826 282 Gene3D Transcription termination factor 3, mitochondrial 33 278 IPR038538 -
Vimu7g03826 282 MobiDBLite consensus disorder prediction 1 25 - -
Vimu7g03826 282 Pfam mTERF 54 265 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03826 Vimu-Chr7 34377223 34379949 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vimu7g03826 mTERF 7.6e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03826 K15031 - gmx:100785219 432.95