Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03809 ATGGCCCCGATAATGCCCTCGGTAAATGTATTTATCGAGGGGCTGAAGGCCCTCGGTAATATCTCACAGTATTATCAACAAGAATCCGCAAAGCTGAGACAGCAAATACAGATGCTGCAAAATTCAAACAGGCACTTGATGGGTGATGCTTTAAGCACACTGACTGTGAAGGAACTTAAGCAATTGGAGAATAGACTTGAAAGAGGAATCACTAGAATCAGATCTCAGAAACATGCATTATTATCGATTAGGAGATTGAACTGGAAAATGAAAATCTGTCTTCGGACTAAGATAATTGATGTTGAGAGGATTCAGCAAGTAAACACGGTTTCTGGACCAGAGCTGAATGCTATTCAGGACCATCTTACCTTTAAAATTAAATGTGTTATTTGCTTGAGAGCTTTCTCTGCATCAACCAATTCTCTGTGTCGGAAGTAA 438 0.3995 MAPIMPSVNVFIEGLKALGNISQYYQQESAKLRQQIQMLQNSNRHLMGDALSTLTVKELKQLENRLERGITRIRSQKHALLSIRRLNWKMKICLRTKIIDVERIQQVNTVSGPELNAIQDHLTFKIKCVICLRAFSASTNSLCRK 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03809 145 Pfam K-box region 22 89 IPR002487 GO:0003700|GO:0005634|GO:0006355
Vimu7g03809 145 Coils Coil 56 79 - -
Vimu7g03809 145 ProSiteProfiles K-box domain profile. 22 121 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03809 Vimu-Chr7 33883631 33886329 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03809 24 119 MADS-box Gene Family AT4G09960 60.377 3.46e-34 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03809 K09264 - vra:106758262 189.119