Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03804 ATGGTGAGGCGAAAGGAAGTGGAGACTGCTTACCGAGAGGCGAAACGAGTGATGAACGCTAGGGAAAGGTCTTCAACGCGATCTTCAACGCCCAAAATAAGGGCTTGCCGAAAGGTGAAACCACTGCCCAAAGTCCTAGAGGCGAGACGAACACGACAATGGTTATGCGAGAAGAACGGAGAGGCGAAAGGAGTGGAGAGTGCAGACGAAGTTCATGTTTCTCGTTGTTACAGTTTGGTTTGCTCTTCACTCTTGATCGACCGTCGCATTACGGTGAAGACAGCCGTCACCGTGGAGGACTGGCCACTGTGGCCCACGAATTGGGAGCTGAAGAAGCAGCACAGTGTGGAGTACTGGATGATGGGAACGCTTCTCCACGACGTCAACGACAGAGAAGTGGTTAGGGTTTCGGTCCTTCTTTGTTCCGTTCTTTTCTTCGCTCAGTTTCAACGCACGCGGCCACAACGTGTAGGATCCCGCCACAAAGACGGATCGTCAATTACAGTTTTTGTAATATTTGTTAATAGGTCACTGAAAATATTATTGAGGAGTTTAAAGCAAACAATGGGGGATCTGACTCTGAGAAACGACATCAAAGGGTATTTTTTCCGCTTCTGCATCACCAATGCCGCCAGTGAGCTCACTCGAAGACTCAACTCAAAAATCTTTGTGGTAAGCATACATGGCTACTGGTTTGAGAATGTTTGTCAAACAGAAAGATATCAAAAGAACTGTTATCTTGCTTTGACCAAAGCTATCAAAGTCTTCCCCATAGGCATGGACAAGGAAACCCTTGTCCTATATGCAGCTAGAGCTTCAAGGACTGAAAACCAGGATGCCATTGATTCATCAATTGTGGGAATGTTAAGTGACCCCAAGGAGGCAAGAGCAGGAATCACCAAGGTGCATTTCTTGCCTTTTAATCCTGTGGACAAGCGCACTGCTATTACCTTCATTGACAACAATGGTGACTGCCACAGAAGCAACAAAGGTGCTCTTGAATATGGCAACAGTCAGGTATCTGCCAAGTTTGGCACCAGCGACGAAGCCACCAACAAGGCCAAGAAGGTTGAGAGTTCCCATGATAAGAATTAG 1095 0.4703 MVRRKEVETAYREAKRVMNARERSSTRSSTPKIRACRKVKPLPKVLEARRTRQWLCEKNGEAKGVESADEVHVSRCYSLVCSSLLIDRRITVKTAVTVEDWPLWPTNWELKKQHSVEYWMMGTLLHDVNDREVVRVSVLLCSVLFFAQFQRTRPQRVGSRHKDGSSITVFVIFVNRSLKILLRSLKQTMGDLTLRNDIKGYFFRFCITNAASELTRRLNSKIFVVSIHGYWFENVCQTERYQKNCYLALTKAIKVFPIGMDKETLVLYAARASRTENQDAIDSSIVGMLSDPKEARAGITKVHFLPFNPVDKRTAITFIDNNGDCHRSNKGALEYGNSQVSAKFGTSDEATNKAKKVESSHDKN 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03804 364 MobiDBLite consensus disorder prediction 344 364 - -
Vimu7g03804 364 Gene3D - 249 361 IPR023299 GO:0000166
Vimu7g03804 364 MobiDBLite consensus disorder prediction 349 364 - -
Vimu7g03804 364 PANTHER CALCIUM-TRANSPORTING ATPASE 253 340 - -
Vimu7g03804 364 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 258 335 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03804 Vimu-Chr7 33829291 33840986 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03804 253 334 Primary Pumps ATPases AT3G42640 78.049 4.22e-36 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03804 K01535 - gmx:102668626 148.673