Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03759 ATGAAGAGAAGAAATGAAAAGGGCATTGCAACCGCCACTGATTTTCAAAATGCAAACGGTAACATGATGAACTTGGTGAATGAGGCATCGCCTGGAACAAGCGCCGGAGAAGCAAATCTCAAGAGCACACAGATCCCTGTAATGGCTCTTTATTGTGTTTCTCCCTCATGGTTTAAGCCTCTTTGGCAACTTGAAGATCAGACACCACGACCTACAAAAAGGCTACATGGATCATCTGTTTTCACACTCAAGGAGATGGAAGAGGCAACATGTTCATTCAGCGATGAGAATCTGCTTGGAAAAGGAGGATTCGGCAAAGTCTACAGAGGCACATTGCGGTCAGGAGAGGTTGTAGCAATCAAGAAAATGGAATTGCCAGCAATTAAAGCAGCAGAGGGGGAGCGTGAGTTCCGAGTCGAAGTTGATATCTTAAGCAGACTTGACCACCCAAATCTTGTTTCTTTGATAGGCTACTGTGCTGATGGAAAGCATAGATTCCTAGTATATGAATATATGCGTAATGGAAACCTGCAAGATCATTTGAATGGAATTGGGGAAAGAAACATGGATTGGCCTCGAAGACTCCAAGTTGCACTGGGAGCTGCAAAAGGTCTTGCTTATCTTCATTCAAGTTCTGATGTTGGAATTCCTATTGTTCATAGGGATTTCAAATCGACCAATATTCTCTTAGATGACAACTTTGAAGCAAAGATATCTGATTTTGGTCTAGCCAAGTTAATGCCAGAAGGACAAGAGACGCATGTGACTGCCAGAGTACTTGGTACCTTTGGCTATTTTGATCCTGAGTATACATCGACTGGAAAACTCACTCTACAAAGTGATGTTTATGCTTTTGGTGTTGTTCTTTTGGAGCTTTTGACTGGACGCCGAGCAGTGGATCTAAACCAAGGTCCCAACGATCAAAACCTTGTACTACAGGAGAGGGGAAATGAGAAGGGGGAGGAACAGCATACCATGCAGAGAAAAATGAAAAAGAAGAGACTATTTAGGTTGTTAACAAACAGGCCAGCTGGCAAAATTCTATTGGAGAGGAAGATTCTGGTTGCGTGTTCCCTTGGCATTTGGGACCCTGTCGTCAGGAACATACTGAATGACCGCAAGAAGCTTCGGAAGGTGATAGATCCAGAGATGGCTCGAAATTCTTACACCATTCAATCTATAGTCATGTTTGCCAATCTGGCATCAAGATGTGTTCGAACTGAGAGTAATGAGAGACCGTCCATGGCAGAATGTGTAAAAGAACTCCTAACGATTATCTATACAAATTCAAAAGGCTTGGGTATGGTTATGCATACTTTGAGAATGATCTAG 1332 0.4279 MKRRNEKGIATATDFQNANGNMMNLVNEASPGTSAGEANLKSTQIPVMALYCVSPSWFKPLWQLEDQTPRPTKRLHGSSVFTLKEMEEATCSFSDENLLGKGGFGKVYRGTLRSGEVVAIKKMELPAIKAAEGEREFRVEVDILSRLDHPNLVSLIGYCADGKHRFLVYEYMRNGNLQDHLNGIGERNMDWPRRLQVALGAAKGLAYLHSSSDVGIPIVHRDFKSTNILLDDNFEAKISDFGLAKLMPEGQETHVTARVLGTFGYFDPEYTSTGKLTLQSDVYAFGVVLLELLTGRRAVDLNQGPNDQNLVLQERGNEKGEEQHTMQRKMKKKRLFRLLTNRPAGKILLERKILVACSLGIWDPVVRNILNDRKKLRKVIDPEMARNSYTIQSIVMFANLASRCVRTESNERPSMAECVKELLTIIYTNSKGLGMVMHTLRMI 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03759 443 CDD STKc_IRAK 99 422 - -
Vimu7g03759 443 Gene3D Phosphorylase Kinase; domain 1 64 171 - -
Vimu7g03759 443 FunFam Os07g0541700 protein 173 262 - -
Vimu7g03759 443 Pfam Protein kinase domain 94 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu7g03759 443 ProSitePatterns Protein kinases ATP-binding region signature. 99 122 IPR017441 GO:0005524
Vimu7g03759 443 FunFam serine/threonine-protein kinase PBS1-like 62 171 - -
Vimu7g03759 443 SUPERFAMILY Protein kinase-like (PK-like) 69 427 IPR011009 -
Vimu7g03759 443 PANTHER OS01G0750732 PROTEIN 71 425 - -
Vimu7g03759 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Vimu7g03759 443 Gene3D Transferase(Phosphotransferase) domain 1 172 433 - -
Vimu7g03759 443 ProSiteProfiles Protein kinase domain profile. 93 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03759 Vimu-Chr7 33057926 33066608 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03759 80 311 Trihelix Transcription Factor Family AT1G26150 53.448 1.39e-78 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Vimu7g03759 Pkinase 1.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03759 - - gmx:100796654 613.609