Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03756 ATGGCAAGATTGGGGAATGGAAATGGCAAATTACTGCCATTTGTGGGAATGATGGCGGCTATGCTAACTCAAAGTGGTAGCATGGTGGTAATCAAAGTTGCCATGATTGATGAACTCAACAAATATGTCATGGTTTTCTACTCTTTTGCACTCTCCACAATCTTGCTTCTTCCCTTTGCCTTGTTTCTCCACAGGTCAGAACGTCCTCCTCTCACGTTCTCTGCAATCTGCAGCTTCTTTCTGCTTGCATTCTTTGGGAGTTCAGGAACTATAATGGCTTATGTTGGAATAGAACTGAGCTCGCCGACACTTGCATCAGCCCTTCTTAACCTCGTTCCAGCTTTCACTTTTATACTTGCACTCATTTTCAGGATGGAAGAAGTACGGTGGAGGAACTCAAGCAGCCAAGCTAAAGTGTTAGGAACAATAACATCAATTGGAGGAGCCTTTGTTGTGATACTGTACAAGGGACCACTCATCTTTAAGACACATTCGACTAACTTTTCTAACCAAATCCTTCAATTTTCAACACAGAAAAATTGGATCTTAGGAGGAATATTCTTCATTGCAGATTCACTTTTTACTTCCATGTGGTACATATATCAGGCTTCGGTAGCAAAGAAATACACAACTGTAACAGTGATTGTATTCTTCCAACTCTTATTTTCAACCATGCAGTGTGGAGTATTTGCCTTAATTGCTGTGAGGGATCCGACTGAATGGAAGCTCAACTTGGATACAGGACTGATTGGCGTTCTATATCAGGCAATAGTTGCAACAATGATACGTTACCTACTATCCACATGGTGCGTCCTTAAAGCAGGTCCTCTGTTTTGTTCTATGTTCAAACCTGTGGCAATCATTTTCACCGCTTTCATGGGTGCAATCTTTCTTGGTGATGATTTCAGTCTTGGAAGTTTGATTGGTGCGGTTATAATCGTGGTTGGATTTTATGCCGTATTGTGGGGGAAATCGAAAGAGGAGAATGAGATTGCAAAAGGGGTTGAGAACTTGGACTCACCATGCCATAATGTTCCTTTGTTGCAAGATAGGAACATGTAG 1062 0.4162 MARLGNGNGKLLPFVGMMAAMLTQSGSMVVIKVAMIDELNKYVMVFYSFALSTILLLPFALFLHRSERPPLTFSAICSFFLLAFFGSSGTIMAYVGIELSSPTLASALLNLVPAFTFILALIFRMEEVRWRNSSSQAKVLGTITSIGGAFVVILYKGPLIFKTHSTNFSNQILQFSTQKNWILGGIFFIADSLFTSMWYIYQASVAKKYTTVTVIVFFQLLFSTMQCGVFALIAVRDPTEWKLNLDTGLIGVLYQAIVATMIRYLLSTWCVLKAGPLFCSMFKPVAIIFTAFMGAIFLGDDFSLGSLIGAVIIVVGFYAVLWGKSKEENEIAKGVENLDSPCHNVPLLQDRNM 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03756 353 PANTHER WAT1-RELATED PROTEIN 13 328 IPR030184 GO:0016020|GO:0022857
Vimu7g03756 353 SUPERFAMILY Multidrug resistance efflux transporter EmrE 242 326 - -
Vimu7g03756 353 Pfam EamA-like transporter family 184 321 IPR000620 GO:0016020
Vimu7g03756 353 Pfam EamA-like transporter family 16 153 IPR000620 GO:0016020
Vimu7g03756 353 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03756 Vimu-Chr7 33010047 33011923 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03756 10 350 Nodulin-like Gene Family AT5G40240 40.401 3.92e-77 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03756 - - gmx:100792109 550.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03756 7 33010047 33011923 Vimu7g03756 7 33010047 33011923 ECH
Vimu10g02173 10 31907391 31908536 Vimu7g03756 7 33010047 33011923 ECH
Vimu7g03756 7 33010047 33011923 Vimu1g02223 1 31931335 31934921 ECH