Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03748 ATGCAGAGCGCAGAGGTAACAACAGTGATGGTTGCTGCCGTGTTTTTGTCTGTGGGTTTGAACACTCTCGTAAAAGCAAATCTCTCCAAAGGCATGAGCAATTACGTTTTTGTTGCTTATTCCAATCTCTTCGGATTCTGCTTCCTGCTAATTACAACCACCCTTCATTACAGAAACAGATCTCCCACACCGCTCGATAACTTCATTCTCTTCAGAATTTTTCTCATTGGCTTCCTCAGTGTTTCCATTCAGACGCTTGCTTATGCTGGGCTTGGATATAGCTCTCCCACTCTCATCTCAGCCATTGAAGATCTTCTTCCAGCTTTTACTTTCATAATTGCTGTTGTTTTCAGGATGGAAAAGCTGGACCTAAACCTAAGAAGCTGCCAAGCAAAAACCATTGGGACTGTGGTTTCAATTGCAGGGGCATTAATAATGACTTTGTACAAAGGTTTTGCTGTGACAAGTAATCTCATGCCAAACAATTTATTTCTCTCATCTCAACAATCACAATGGCTACTAGGAGCATTTCTCGTAGCAACTGCTGCCTTTTGTGGTTCAGTCTCACTTGTTATACAGACATGGACAATTAACGATTACCCAGAGGAGCTAATGCTAATAACCATTGCTACCAGTTTCTCTGTAATCCTATCTTTCGTAGTTGCTTTGATTGCAGAGCAAAATCCCAAGGCATGGATACTTAAGCCTGATATGAAATTGGCCATTGTAGTGCTGTCTATACGAAGTGTGGTGTATGCATGGGCATGTCGAAAGAAGGGAGCTGTGTATGTTGCTATGTTCACTCCTTTAGGAATTGTGATTGCACTTGTTATGGGGATTGTGTTTCTCGGAGACACTCTATATCTTGGAAGTGTGATCGGAGCTGCTACAATAGCTGTTGGCTTTTATGCTGTAATATGGGGTCAGGCTCAAGAAGAAAACATGACTTGTGAAAAACACGGAACCTGTGGAATTATTTGTTCATCTTCATCTTGTTCTGACACCCTCTTACTGCATAAAACCAAAGATACAATGGTAGCATGA 1044 0.4157 MQSAEVTTVMVAAVFLSVGLNTLVKANLSKGMSNYVFVAYSNLFGFCFLLITTTLHYRNRSPTPLDNFILFRIFLIGFLSVSIQTLAYAGLGYSSPTLISAIEDLLPAFTFIIAVVFRMEKLDLNLRSCQAKTIGTVVSIAGALIMTLYKGFAVTSNLMPNNLFLSSQQSQWLLGAFLVATAAFCGSVSLVIQTWTINDYPEELMLITIATSFSVILSFVVALIAEQNPKAWILKPDMKLAIVVLSIRSVVYAWACRKKGAVYVAMFTPLGIVIALVMGIVFLGDTLYLGSVIGAATIAVGFYAVIWGQAQEENMTCEKHGTCGIICSSSSCSDTLLLHKTKDTMVA 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03748 347 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 150 - -
Vimu7g03748 347 SUPERFAMILY Multidrug resistance efflux transporter EmrE 219 310 - -
Vimu7g03748 347 PANTHER WAT1-RELATED PROTEIN 7 318 IPR030184 GO:0016020|GO:0022857
Vimu7g03748 347 Pfam EamA-like transporter family 10 147 IPR000620 GO:0016020
Vimu7g03748 347 Pfam EamA-like transporter family 174 306 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03748 Vimu-Chr7 32931232 32936009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03748 17 343 Nodulin-like Gene Family AT5G40240 39.296 6.85e-75 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03748 - - gmx:100792641 478.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03748 7 32931232 32936009 Vimu7g03748 7 32931232 32936009 ECH