Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03744 ATGAAAATTCCCAATGGGTCTATGCAGTCTTCTGGAGGATCTTGCCAAGAAACTACCCTCCACCCAAGTGGGAAGGACAAGGGGCTTATGATAGATCAAGAGGAAACAGAAGGAATTGGTATGTTTCCAGTGTTGAGGATACTGGTGTGGGAAGATGGTTTCTGCAATTTTGCTGCATCGGCAGCTCCTGAAATCAACTCTGGAGATTGTCCCACCTCGTCCGTTTATGGGAACTGTGAATTTCAGCCCTACCAAGGACTGCAACCGGAACTCTTCTTCAAGATGTCCCATGAGATCTACAACTATGGAGAAGGATTTGAAAGCAAAGTAAATTATGTTGAATGGAGCAGGTTAATAGGAAAAGTTGCTGCAGATCACAGCCACAAGTGGATATACAAAGAGCCTAATGATCAAGAAATCAACTTCTTGTCAGCATGGCACAATTCAGCAGATTCGCACCCTAGGACTTGGGAAGCCCAGTTCCTGTCTGGTATAAAGACCATAGCTCTTATTGCTGTGAGAGAAGGTGTTGTTCAATTAGGAGCTGTTCACAAGGTGATTGAAGACCTGAGCTATGTGGTTCTTCTAAGAAAAAAGTTCAGCTACATTGAGAGCATCCCTGGTGTGCTGTTGCCACATCCATCATCTTCTGCATACCCTTATAAAGTAGAAGGAGGGTATGGAGTTCCAGAACAATGGCATTTCCAAGGGAACCATCTTGCACCTCAAGCTGAGTTATATGAGAACCATTTCAACATGCCACTGAAGATAACTCCCTCAATGAGCAGTCTGGAAGCACTTCTGTCAAAGCTTCCCTCAGTGGTGCCACCACCACATCCAACACAACCACCACAGTCTCATCATCATCATCATCAACTTCTGGCATCACCCCAGCAAAGGCCACTGGAGTTCATGGGATCAATGCAGAAAGTTGCAAAAGAAGAGTTAGAAGAAGAGGTATACAGACCAGAACTTGACATTGGTGAGAGCAGCACTTCCATGCCAGGCTACCACCATCAACATCACTTCCATCAAGATCAGAATAATGTAACTAGGAGTGGAGCCAACGATGGATTTTGA 1080 0.4491 MKIPNGSMQSSGGSCQETTLHPSGKDKGLMIDQEETEGIGMFPVLRILVWEDGFCNFAASAAPEINSGDCPTSSVYGNCEFQPYQGLQPELFFKMSHEIYNYGEGFESKVNYVEWSRLIGKVAADHSHKWIYKEPNDQEINFLSAWHNSADSHPRTWEAQFLSGIKTIALIAVREGVVQLGAVHKVIEDLSYVVLLRKKFSYIESIPGVLLPHPSSSAYPYKVEGGYGVPEQWHFQGNHLAPQAELYENHFNMPLKITPSMSSLEALLSKLPSVVPPPHPTQPPQSHHHHHQLLASPQQRPLEFMGSMQKVAKEELEEEVYRPELDIGESSTSMPGYHHQHHFHQDQNNVTRSGANDGF 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03744 359 MobiDBLite consensus disorder prediction 1 21 - -
Vimu7g03744 359 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 47 327 - -
Vimu7g03744 359 MobiDBLite consensus disorder prediction 271 295 - -
Vimu7g03744 359 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 46 200 IPR025610 -
Vimu7g03744 359 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 15 - -
Vimu7g03744 359 MobiDBLite consensus disorder prediction 327 359 - -
Vimu7g03744 359 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03744 Vimu-Chr7 32888754 32890614 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03744 94 200 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 37.037 3.57e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03744 - - vun:114173114 548.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03744 7 32888754 32890614 Vimu7g03744 7 32888754 32890614 ECH