Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03718 ATGGAGTCACTTGAAGTTGCAGCACTGCCACCGCCACTGGCACTGCTACAGCCACCGCCACCACCTATTTCTTTTGAATCGGCGGCAACACCTTCCACAGCCCCCAAATCGATTGTCATAGATTCTGATCCCAAATCTTCCACATTACCAGTGTCAAATCCTGACTCTAGCAAGTTACTACCCTCGAAGGAACAACACCACAGAGACCTATTGAACCACCGTGAAATAATGCGTGTTGTAGTTAGTAGTAATTTAAAACCGGTTTCACTTGAATTAGGAAGTAAGTCTCCCATCATAATTTTTTATGATGTTGATGTAAATAAAGTTGTCGAGCTTGCCCTCTTGGGCATCGTATTCAACAAGGGAGAAATCTGTGTTGCAGGTTCTCGTGTGCTTGTTCAAGAAGGGATTTATGATGAATTTGAGAAGAAATTGGTGGAGAAAGCAAAAGCTTGGGTGGTTGGTGATCCTTTTGATCCTAAAGTTCAAAAGGATTGA 498 0.4297 MESLEVAALPPPLALLQPPPPPISFESAATPSTAPKSIVIDSDPKSSTLPVSNPDSSKLLPSKEQHHRDLLNHREIMRVVVSSNLKPVSLELGSKSPIIIFYDVDVNKVVELALLGIVFNKGEICVAGSRVLVQEGIYDEFEKKLVEKAKAWVVGDPFDPKVQKD 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03718 165 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 74 93 IPR016162 GO:0016491
Vimu7g03718 165 MobiDBLite consensus disorder prediction 27 59 - -
Vimu7g03718 165 MobiDBLite consensus disorder prediction 1 65 - -
Vimu7g03718 165 SUPERFAMILY ALDH-like 74 163 IPR016161 GO:0016491
Vimu7g03718 165 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 74 163 - -
Vimu7g03718 165 MobiDBLite consensus disorder prediction 12 26 - -
Vimu7g03718 165 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 118 129 IPR016160 GO:0016491
Vimu7g03718 165 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 94 163 IPR016163 GO:0016620
Vimu7g03718 165 Pfam Aldehyde dehydrogenase family 74 163 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03718 Vimu-Chr7 32514506 32515082 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03718 74 164 Aldehyde Dehydrogenase Gene Family AT3G24503 62.887 5.35e-35 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03718 K12355 - gmx:100791396 157.918