LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu7g03674	ATGATACTAGCTGTCTCTGGCACTGGCAGCAGAAGCAGAAAAGTTCCAGAAATTCTGGTAAGGAACGAGGCAAAGGAACGCAGCGTTTCGTTTCGTGTCGCCATCATGGATGAAATGTACGGAGTGCCGGACTACGCCGACAAGCCACTCATGACTCCGGAGAATCTGATTTTCCCTCCGGACTACCCCGCCTTCCTCACAGCCGCCCGGATTCCTATCTTCGGATCCGACGAACTCTTCTCCGGCGAGCCTTCCGCCGCTTCCGCCTCTCCTGCTGGAATTCCGCGCCACCAGGACGATGATGTCGCAACCACTGTCATGAAGGCAAAAATCGCCTCCCACCCTCACTACCCTCGCCTCCTCCAAGCTTACATCGATTGCCAGAAGGTTGGGGCGCCTCCGGAAATCGCGCGTCTGTTGGAGGAAATCCGGCGAGAAAACGACCTGTGCAAGAGCGACGTTGTTTCCACGTGCTTTGGAGCCGATCCCGAGCTCGACGAGTTCATGGAAACCTACTGCGACATGCTCGTGAAGTATAAATCCGACTTGGCTCGCCCCTTTGACGAAGCAACCACTTTCCTCAACAAGATCGAAATGCAACTAAGCCATCTCTGCACTGGCGCTTCTGTTTCCACCGTTTCTGGTTTGTTTTTCTTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCCCTCTCTCGCTTCGGTATCTTACTAGCTGTAGCTCTCGCTCACGCTAGTGCTATTATAATTTCTGAACTCGATGTTCGTTTTTGA	786	0.5305	MILAVSGTGSRSRKVPEILVRNEAKERSVSFRVAIMDEMYGVPDYADKPLMTPENLIFPPDYPAFLTAARIPIFGSDELFSGEPSAASASPAGIPRHQDDDVATTVMKAKIASHPHYPRLLQAYIDCQKVGAPPEIARLLEEIRRENDLCKSDVVSTCFGADPELDEFMETYCDMLVKYKSDLARPFDEATTFLNKIEMQLSHLCTGASVSTVSGLFFFPLSLSLSLSLSLSFSLSRFGILLAVALAHASAIIISELDVRF	261

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu7g03674	261	SMART	KNOX1_2	105	149	IPR005540	GO:0003677\|GO:0005634
	Vimu7g03674	261	Pfam	KNOX2 domain	159	205	IPR005541	GO:0003677\|GO:0005634
	Vimu7g03674	261	PANTHER	HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1	98	206	-	-
	Vimu7g03674	261	SMART	KNOX2_2	155	206	IPR005541	GO:0003677\|GO:0005634
	Vimu7g03674	261	Pfam	KNOX1 domain	107	148	IPR005540	GO:0003677\|GO:0005634

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu7g03674	Vimu-Chr7	31891134	31892284	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vimu7g03674	36	207	Homeobox Transcription Factor Family	AT1G23380	65.426	3.64e-73	225

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu7g03674	-		-	gmx:100785764	278.485

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