Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03674 ATGATACTAGCTGTCTCTGGCACTGGCAGCAGAAGCAGAAAAGTTCCAGAAATTCTGGTAAGGAACGAGGCAAAGGAACGCAGCGTTTCGTTTCGTGTCGCCATCATGGATGAAATGTACGGAGTGCCGGACTACGCCGACAAGCCACTCATGACTCCGGAGAATCTGATTTTCCCTCCGGACTACCCCGCCTTCCTCACAGCCGCCCGGATTCCTATCTTCGGATCCGACGAACTCTTCTCCGGCGAGCCTTCCGCCGCTTCCGCCTCTCCTGCTGGAATTCCGCGCCACCAGGACGATGATGTCGCAACCACTGTCATGAAGGCAAAAATCGCCTCCCACCCTCACTACCCTCGCCTCCTCCAAGCTTACATCGATTGCCAGAAGGTTGGGGCGCCTCCGGAAATCGCGCGTCTGTTGGAGGAAATCCGGCGAGAAAACGACCTGTGCAAGAGCGACGTTGTTTCCACGTGCTTTGGAGCCGATCCCGAGCTCGACGAGTTCATGGAAACCTACTGCGACATGCTCGTGAAGTATAAATCCGACTTGGCTCGCCCCTTTGACGAAGCAACCACTTTCCTCAACAAGATCGAAATGCAACTAAGCCATCTCTGCACTGGCGCTTCTGTTTCCACCGTTTCTGGTTTGTTTTTCTTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCCCTCTCTCGCTTCGGTATCTTACTAGCTGTAGCTCTCGCTCACGCTAGTGCTATTATAATTTCTGAACTCGATGTTCGTTTTTGA 786 0.5305 MILAVSGTGSRSRKVPEILVRNEAKERSVSFRVAIMDEMYGVPDYADKPLMTPENLIFPPDYPAFLTAARIPIFGSDELFSGEPSAASASPAGIPRHQDDDVATTVMKAKIASHPHYPRLLQAYIDCQKVGAPPEIARLLEEIRRENDLCKSDVVSTCFGADPELDEFMETYCDMLVKYKSDLARPFDEATTFLNKIEMQLSHLCTGASVSTVSGLFFFPLSLSLSLSLSLSFSLSRFGILLAVALAHASAIIISELDVRF 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03674 261 SMART KNOX1_2 105 149 IPR005540 GO:0003677|GO:0005634
Vimu7g03674 261 Pfam KNOX2 domain 159 205 IPR005541 GO:0003677|GO:0005634
Vimu7g03674 261 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 98 206 - -
Vimu7g03674 261 SMART KNOX2_2 155 206 IPR005541 GO:0003677|GO:0005634
Vimu7g03674 261 Pfam KNOX1 domain 107 148 IPR005540 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03674 Vimu-Chr7 31891134 31892284 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03674 36 207 Homeobox Transcription Factor Family AT1G23380 65.426 3.64e-73 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03674 - - gmx:100785764 278.485