LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu7g03670	ATGAAGAAAGTAGTCTCTCTCATCTCTTTATGCCACCTTGTTCTGATCAAGTTACTACTGCTATCAAAGACTGTTATAGCAGAACCAAGGGCCAAGACAGTCCTGGTAACATGTGGCCATGTACGAGAGCATAATTCTACTATATTTGTTCCCAATTTTGTTGCAACTATGGAGAAGATCAGTGATGAGATGAGGAAAACTGGCTTTGGCACAGCAGTTGTAGGGACAGGACCAGATACTAACTATGGCCTGGCCCAGTGTTATGGGGATCTTTCGTTGCTTGACTGTGTATTGTGCTATGCTGAGGCACGCACTGTTCTTCCTCAGTGCTACCCTTATAATTCTGGTCGCATTTTCCTTGATGGATGCTTCATGAGGGCTGAGAATTATAGTTTCTTTAATGAGTATACAGGACCAGGAGACAAAGCTGTATGTGGGAACACGACCAAGAAGAATTCAAGTTTTCAAGCAGCGGCAAAGCAAGCAGTTTTAAGAGCAGTTCAAGATGCACCCAACAACAAAGGATATGCTAGAGGGAATGTTGCTGTCGCAGGAACAACTAACCAATCTGTTTATGTTCTGGCTGATTGTTGGAGGACTTTGGACCAAAGGTCTTGCAAAGCATGTCTTGAGAATGCATATTTTTCCTTACAGGGATGCCTGCCCTGGTCAGAAGGGCGAGTACTCAACACCGGCTGCTTCATGAGGTACTCAGACACCGATTTTCTTAACAAGGAACAGGGAAATGGGAGTTCAAGAGGTAACGTGGCAGTAATAGTGGTTGCAGTAGTTAGTTCGGTGATTGTTTCAGTGGTTGGAGTAACTATTGGAGTTTATATATGGAAACAAAGATACATTCAGAAGAAACGAAGAGGTTCAAATGAAGCAGAAAAGTTAGCAAAATCTCTGCAGAACAAAAGCTTGAACTTCAAGTACTCTACATTGGATAAAGCTACTGGATCTTTTCATGAAAATAACAAGTTAGGGCAGGGAGGATTTGGAACAGTTTATAAAGTACTTCTCTTCTCTGAAGACAAATATCTGTCCATCATTGGAGTTCTAGCTGATGGAAGAGAGATTGCTATCAAGAGGTTATATTTCAACAACAGACATAGAGCAGCAGATTTCTACAACGAAGTCAACATAATTAGTAGTGTGGAACACAAGAATCTGGACCTGAAAGCCTGCTTGTTTATGAATTTCTACCCAATAAAAGTCTTGATCGCTTCATTTTTGGTAATTACGGAACTCATGCAATTTGAAATTATCATCGGGACAGCCGAAGGATTAGTTTATCTGCACGAGAACTCTAAAACAAAGATAATTCACAGAGATATAAAAGCCAGCAACATCCTATTGGATGCAAAGTTTCGTGCTAAAATTGCAGATTTTGGTTTGGCCAGGTCCTTTCAAGAGGACAAGAGCCACATAAGTACCGCTATTGCAGGAACTTTCAATATTGTATCTGAGATAACCATTTACTCTTGGTCCTGCAGGGGGTATATGGCTCCTGAGTACCTAGCTCATGGTCAGTTAACAGAAAAGGCAGACGTGTATAGTTTTGGAGTGTTGCTGCTAGAGATGGTCACTGGTAGACAGAACAACAGGAGCATAGTATCAGAGTATTCAGACAGCTTAGTTACAGTGGCAGGGACTGCTGAACAATTATTTGATCCAAATATAGAGTTACAGGAAGACCACAACAGCGAGGTTAAGGATGAGATTTTAAGAGTGGTTCACATAGGACTTCTATGCACCCAAGAGGTCCCTTCGTTACGACCAATCATGTCAAAGACATTAAAGATGCTAACAAAGAAGGAGGAGAATCTAATTGCTCCTTCTAATCCACCCTTCCTAGATGAGAGTACCATGGAACTTCATGACACAAGTGCTGACCCATTTTATCCTCTTAATGCAGCTGATTCAATGGCTACCATGTCCCATAGCTCTTTCTATCCCAGGTGA	1965	0.4158	MKKVVSLISLCHLVLIKLLLLSKTVIAEPRAKTVLVTCGHVREHNSTIFVPNFVATMEKISDEMRKTGFGTAVVGTGPDTNYGLAQCYGDLSLLDCVLCYAEARTVLPQCYPYNSGRIFLDGCFMRAENYSFFNEYTGPGDKAVCGNTTKKNSSFQAAAKQAVLRAVQDAPNNKGYARGNVAVAGTTNQSVYVLADCWRTLDQRSCKACLENAYFSLQGCLPWSEGRVLNTGCFMRYSDTDFLNKEQGNGSSRGNVAVIVVAVVSSVIVSVVGVTIGVYIWKQRYIQKKRRGSNEAEKLAKSLQNKSLNFKYSTLDKATGSFHENNKLGQGGFGTVYKVLLFSEDKYLSIIGVLADGREIAIKRLYFNNRHRAADFYNEVNIISSVEHKNLDLKACLFMNFYPIKVLIASFLVITELMQFEIIIGTAEGLVYLHENSKTKIIHRDIKASNILLDAKFRAKIADFGLARSFQEDKSHISTAIAGTFNIVSEITIYSWSCRGYMAPEYLAHGQLTEKADVYSFGVLLLEMVTGRQNNRSIVSEYSDSLVTVAGTAEQLFDPNIELQEDHNSEVKDEILRVVHIGLLCTQEVPSLRPIMSKTLKMLTKKEENLIAPSNPPFLDESTMELHDTSADPFYPLNAADSMATMSHSSFYPR	654

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu7g03670	654	FunFam	Os07g0541700 protein	413	484	-	-
	Vimu7g03670	654	ProSiteProfiles	Protein kinase domain profile.	322	619	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Vimu7g03670	654	Pfam	Salt stress response/antifungal	48	130	IPR002902	-
	Vimu7g03670	654	Pfam	Salt stress response/antifungal	145	239	IPR002902	-
	Vimu7g03670	654	Gene3D	Phosphorylase Kinase; domain 1	282	395	-	-
	Vimu7g03670	654	SMART	serkin_6	322	619	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Vimu7g03670	654	ProSiteProfiles	Gnk2-homologous domain profile.	31	132	IPR002902	-
	Vimu7g03670	654	Gene3D	Transferase(Phosphotransferase) domain 1	410	614	-	-
	Vimu7g03670	654	Pfam	Protein kinase domain	322	577	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Vimu7g03670	654	ProSiteProfiles	Gnk2-homologous domain profile.	137	242	IPR002902	-
	Vimu7g03670	654	FunFam	Cysteine-rich receptor-like protein kinase 3	141	242	-	-
	Vimu7g03670	654	Coils	Coil	286	306	-	-
	Vimu7g03670	654	PANTHER	CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3	82	628	-	-
	Vimu7g03670	654	FunFam	Cysteine-rich receptor-like protein kinase 2	31	132	-	-
	Vimu7g03670	654	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	441	453	IPR008271	GO:0004672\|GO:0006468
	Vimu7g03670	654	Gene3D	-	32	132	IPR038408	-
	Vimu7g03670	654	Gene3D	-	142	242	IPR038408	-
	Vimu7g03670	654	SUPERFAMILY	Protein kinase-like (PK-like)	306	630	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu7g03670	Vimu-Chr7	31849248	31854251	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vimu7g03670	1	654	Receptor kinase-like Gene Family	AT1G70520	59.178	0.0	738

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Vimu7g03670		Pkinase	1.3e-29	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu7g03670	-		-	gmx:100305420	1013.83