Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03640 ATGTTCAGATCAACTCAACCCGCTTCAAAACCTTCCAAATCCACCATCAAATTCCTCTGCAGTTACGGCGGCAGAATCCTCCCCCGTTATCCTGACGGCAAGCTCCGCTACCTCGGAGGCCACACCCGCGTCCTCGCCGTCGACCGCTCTATTAACTTCTCCGAGCTGCTGCTGAAGCTGGAAGAGCTCTGCGGTGCCTCCGTTAGGCACCTCCGCTGCCAATTACCCTCCGAAGACCTCGACGCTCTTATCTCCATCACCTCCGACGAAGATCTCGCCAATCTCATCGAGGAATACGACCGCGTTTCATCGCTCAAGATCAGAGCCTTCCTCTCGCCACCCACGCCGTCGAGATCTCCGAACAACGCTTCCATTCCTCCGTCGAAATCAGCTTCATTATCTTCCTCCTCAGCCTCATCGTCGTCGTCGTCGTCTTCGTCGTATTGCAGCCCTACCGGCAAATCTGGGCCGAGTTACAGAACCTCGGCGACGGTGGTCGACCGTTGCGTCCATCAGATATCGCCGGCTCCGGCGTACCGGACCGCAGTGGACAAATCGAAACCATCCGGGAGGAATATTCCTCTCCCGCGCTACGGTTACCACGGGAGCGGTGGCCAGGTTTACCTGATCCACCACGGAAACCACTGGCAATAA 654 0.5719 MFRSTQPASKPSKSTIKFLCSYGGRILPRYPDGKLRYLGGHTRVLAVDRSINFSELLLKLEELCGASVRHLRCQLPSEDLDALISITSDEDLANLIEEYDRVSSLKIRAFLSPPTPSRSPNNASIPPSKSASLSSSSASSSSSSSSSYCSPTGKSGPSYRTSATVVDRCVHQISPAPAYRTAVDKSKPSGRNIPLPRYGYHGSGGQVYLIHHGNHWQ 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03640 217 PANTHER OS05G0427100 PROTEIN-RELATED 9 181 - -
Vimu7g03640 217 SUPERFAMILY CAD & PB1 domains 32 120 - -
Vimu7g03640 217 MobiDBLite consensus disorder prediction 114 160 - -
Vimu7g03640 217 Pfam PB1 domain 32 113 IPR000270 GO:0005515
Vimu7g03640 217 SMART PB1_new 30 114 IPR000270 GO:0005515
Vimu7g03640 217 Gene3D - 34 112 - -
Vimu7g03640 217 MobiDBLite consensus disorder prediction 113 160 - -
Vimu7g03640 217 CDD PB1_UP2 19 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03640 Vimu-Chr7 31480271 31481090 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03640 16 111 MAP Kinase Kinase Kinase AT5G57610 51.485 1.37e-27 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03640 - - gmx:100810685 310.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03640 7 31480271 31481090 Vimu7g03640 7 31480271 31481090 ECH
Vimu7g03640 7 31480271 31481090 Vimu10g01304 10 13629328 13630734 PCT