Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03619 ATGGCTCATAACTCAGAGAACAGCAGCACCTGCTTTGATGATGATTTTGAATGTGATGAAGCGGATGATTCTAGAATCTTGCATTGCTGGAACCACCGGAACCTTGATTCTGGATATGAGGATGGTGGTGGATCGGAGGAATTAGCATGTGCTGTGCCCCAGAGTGAGGAAACTGTGAGGGCTATGGTGGCGAGAGAGAGGGAGCATTTCCCGAGGGTTGATTACTTGCAGAGACTAAGGAGCGGGAAGTTGGACTTGGGTGTCAGGAGGGACGCACTTGATTGGATTTGGAAGGCTCATGCTTATTTTGGCCTTGGACCCTTGAGTTTTTGTTTGGCTGTGAACTACTTGGATCGCTTCCTGTCGGTTTTTGACTTACCGAAAGGTGTAAGTTGGACTGTGCAATTGTTAGCTGTAGCGTGCTTATCGATTGCAGCTAAAATGGACGAGATTAGAGTGCCTCAATCTGTAGATTTACAGGTTGGGGAACCAAAGTTTGTGTTTGAAGCTAAAACCATTAAAAAAATGGAACTACTGGTCTTAAGCAAGTTGAGATGGAAAATGTACGCATTAACTCCTTATTCCTTCATAGAATACTTCCTTAGCAAGATCACTTGTGAGAAGCACCCAACAAAATCATCCATTGCAATATCAGTGCAGCTTATCCTCCGTATAATCAGTGGTATCGACTTCTTGGAATTCCGGCCTTCTGAAATTGCTGCTGCGGTGGCAATTTCTGTTTTAGGAGAATCACAAGCGAAAGATATGGATAAGTCCATTGCTGATCTCTTTATAGTAGAGAAGGGTAGAGTTCTAAAGTGTGCTGAATTGATAAGAGATTTGTCCTTGAACAATGTTGCTGCTAGTGTAGGAAGCAAGGTGCCACATGTGCCTCAAAGTCCTATGGGTGTGATAGATGCCGCTGGGTGCTTGAGTTATAAGAGTGATGAATTAACAGTTGGATCATGTTTAAATTCTTCACATGATAGTCCAAGTCCAAACACTAAGAGTAGTAAAGCAGAAGGACCTTCTAATGAACCTCCAAGTGATGAAATGTGA 1059 0.4325 MAHNSENSSTCFDDDFECDEADDSRILHCWNHRNLDSGYEDGGGSEELACAVPQSEETVRAMVAREREHFPRVDYLQRLRSGKLDLGVRRDALDWIWKAHAYFGLGPLSFCLAVNYLDRFLSVFDLPKGVSWTVQLLAVACLSIAAKMDEIRVPQSVDLQVGEPKFVFEAKTIKKMELLVLSKLRWKMYALTPYSFIEYFLSKITCEKHPTKSSIAISVQLILRIISGIDFLEFRPSEIAAAVAISVLGESQAKDMDKSIADLFIVEKGRVLKCAELIRDLSLNNVAASVGSKVPHVPQSPMGVIDAAGCLSYKSDELTVGSCLNSSHDSPSPNTKSSKAEGPSNEPPSDEM 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03619 352 SMART Cyclin_C_2 191 313 IPR004367 -
Vimu7g03619 352 PANTHER CYCLINS 33 279 IPR039361 -
Vimu7g03619 352 Gene3D - 72 189 - -
Vimu7g03619 352 MobiDBLite consensus disorder prediction 322 352 - -
Vimu7g03619 352 Gene3D - 61 276 - -
Vimu7g03619 352 SMART cyclin_7 94 182 IPR013763 -
Vimu7g03619 352 FunFam D6-type cyclin 185 276 - -
Vimu7g03619 352 SUPERFAMILY Cyclin-like 50 188 IPR036915 -
Vimu7g03619 352 MobiDBLite consensus disorder prediction 322 344 - -
Vimu7g03619 352 Pfam Cyclin, N-terminal domain 60 189 IPR006671 -
Vimu7g03619 352 FunFam D2/4-type cyclin 72 184 - -
Vimu7g03619 352 CDD CYCLIN_AtCycD-like_rpt2 192 278 - -
Vimu7g03619 352 ProSitePatterns Cyclins signature. 89 120 IPR006671 -
Vimu7g03619 352 CDD CYCLIN_AtCycD-like_rpt1 88 186 - -
Vimu7g03619 352 Pfam Cyclin, C-terminal domain 192 287 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03619 Vimu-Chr7 31112994 31115845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03619 54 259 Core Cell Cycle Gene Families AT5G65420 59.615 1.07e-85 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03619 K18810 - gmx:100794010 498.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03619 7 31112994 31115845 Vimu7g03619 7 31112994 31115845 PCT