Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03610 ATGTTCATTCATTGTTCTCAGGAAGGATCAAGCTATGATAGAGGATTATATTCTCGTTGCTTTGAGGAGTTGTTTGACTTGTCCAACTTGGACACAACTGCTACTTCTCAATATACATTCTCTGTTACTATTTGTGAGCTCTATAACGAACAGATAAGGGATCTGATCTCGGAGTCAGGGAAAAACTTGCCTAAACTGTGTTTTGCTTCACCTGAATATCTCATAGAACTAATGCAGGAAAAAGTTGATAACCCTATGGAATTTTCTAGGGTTTTGAAAGCTGCATTTCAGAGTCGAGGAAATAATCCATTAAAGATTAATGTTTCTCATTTGTATGGTCTCTGGCCTATATTATGCATGGCTACATTGATTGTTACCATACACATATTTTATAACAATTTGATCAGCGGTGAAAACTCATATAGCAAGTTGTCTCTGGTTGATTTGGCTGGAAGTGAAGGTTTGATATCAGAAGATGATAGTGGTGAGCGTGTCACAGATATGCTTCATGTTATGAAGTCACTTTCAGCGCTGGGAGATGTATTATCTTCTTTGACATCAAAAAAGGATGTTATTCCTTATCAAAACTCAGTGTTGACGAAACTGTTTGTGGATTCTCTTGGTGGAAGTTCAAAATCTCTGATGATTGTAAATGTGTGTCCAAATTCTTCGAATTTATCTGAGACATTACTGTCTCTCAATTTCTCTGCCAGAGCTCGTAATTCTGTCTTAAGCCTTGGAAATCGAGATACAATTAAGAAGTGGAGAGATGTTGCAAATGATTCACGTAAAGAGTTATATGAGAAGGAAAAAGAAATCCAAGATCTCAAACAAGATGGTTTGAGACTTAAGCAAGCACTGAGAGATGCAAATGATCAGTGTGTTCTACTCTTCAATGAAGTACAAAAGGCATGGAAAGTTTCTTCTGCATTGCAGACAGATTTACAGGCAGAGCATATTTTGCTGGCTGATACTTATAAGGCAGAGAAAGAAGAAAATTCTCAGCTTAGAAATCAAGTTGCTCATATGTTACAGTTAGAAAAAGCACAAAATTTGCAGATACAACAGCGCGATTCAACCATTAAAAGTTTGGAGTACTACAATTGCAACTGTGCCATCCACCTATCATCTGCTGTAGTATGTGGCATGGCATTGCTGATCATGGCTTGCCACCTGAGCTTTGTTATATATATGGCAACTGTGGCCAAAATTGGAAGCCTTGAAATACAACTCAATGAAGCCCTTAGATCCAGCAACACTAGGTTAAATGTTGTACCAGAAACTGTTTCCGGAGCTATACCTAATTCCAGGACAACAGGGGATAGGTTGCATGTAGAAAATGAGAAATTATTTGATAAGTTGACTGAGAAAGCATCTCTGGCTGGATCACCTAAGCTGTCAAGTCCATTATCTAGGGGATCAATTAATGTTGAGCCTGGAAATGTGGGCAGCACAACTGCAAGAGCTCGTTCTATGGATGTTCTTCCTTCAACTTTTGTCACAGATAAGAATGATGGCACTGTTGCTTTAGTTAAATCTGGTTCTGAGAGAGTTAAGACTACCCCTGCCGGTGAATATCTTACTGCAGCACTGAATGACTTTAATCCTGATCAGTATGAAGGACTTGCTGCCATTTCTGATGGTGCAAACAAGCTTCTGATGCTGGTTCTGGCTGCTGTCATCAAAGCTGGTGCGTCCAGAGAACACGAAATACTTGCTGAAATTAGAGATGCTGTTTTTTCATTTATTCGAAAAATGGAGCCAAGGCAAGTAATGGATACCATGCTTGTTTCCCGTGTTAGAATCTTGTATATAAGATCTTTGCTTGCCAGATCCCCAGAGTTGCAATCCATTAAGGTATTGCCAGTTGAGTGCTTTCTTGAAAAGGCCAACACTGGACCCAGTAGAAGTTCCAGCCGAGCAAGCAGTCCTGGAAGATCTTCAGTGCAATATGTTGATGAGCAGATCCAGGGATTTAAAGTGAATATAAAGCCAGAAAAGAAATCGAAATTTTCATCTGTTGTGTTGAAGATACGTGGGATTGATGAGGAAACCTGGAGACAGCAGGTAACTGGGGGAAAGCTTAGGGAAATCAGTGAGGAAGCAAAAAGTTTTGCAATTGGAAACAAGGCTCTTGCTGCACTCTTTGTACATACTCCAGCTGGAGAGCTGCAGCGCCAAATTAGATCCTGGCTTGCAGAGAAGTTTGATTTTCTATCTATTATGGGAAATGATGCAACGGGGGGGACAAATGGTCAGTTGGAGCTTATTTCAACTGCGATTATGGATGGTTGGATGGCTGGACTTGGCAGTGCTCTGTCTCCCCAAACTGATGCCCTTGGCCAACTTCTATTTGAATATTCAAGACGTGTCTATACTTCTCAACTGCAGCACTTGAAGGATATTGCTGGTACCTTGGCAACAGAAGAGGCTGAAGATGCGGCACAAGTGGCCAAGTTGCGTTCAGCACTAGAATCTGTTGATCACAAAAGAAGAAAGATTTTACAACAAATGAGAAGTGATGTAGCTTTACTGACCTTGGAAAATGGTGGTTCACCTGTTCAAAATTTTTCTACTGCTGCTGAGGATGCAAGATTAGCGTCTCTTATTTCACTTGATAGAATATTGAAGCAAGTCAAGGATATAACTAAACTTTCTACTGTGAACACCATCGAGAAAAGTAAGAAAAGAACGGTGCTTGGTTCTCTAGACAAACTGACAGAACAAATGTCTTCACTTCTTGAAATTGATCATCCATGTGCTCAGAGGGACATTGCAGATGCTCGCAGAGTGGTTGAGTCAATTCCTGAAGAAGATGACCGCATTCAGAACCTATCACATTCTCGTATGCCATCTACTGATACAGGCTCTGGGTCTGGAACTGATGTGGCACAGTGGAATGTCCTTCAATTCAATACGGGTAATACCTCCTCATTTATAATAAAATGTGGAGCAAACTCAAATTCAGAACTAATCATTAAAGCCGAGGCTAGAGTTCAGGAACCTAAAGGAGGTGAGATTGTGAGGGTTGCCCCAAGGCCATCCATTTTGGAAAATTTGAGCTTGGAAGAAATGAAACAAGTATTTGCTGAACTACCCGAGGCTCTAAGATTGCTTGCCCTAGCAAGGACTGCAGATGGAACTCGAGCACGATATTCTAGATTATATAGGACTTTGGCTATGAAGGTTCCATCACTTAGGGATCTGGTAAGTGAGCTTGAAAAAGGGGGTGCACTGAAAGATGTGAGGACATGA 3255 0.4071 MFIHCSQEGSSYDRGLYSRCFEELFDLSNLDTTATSQYTFSVTICELYNEQIRDLISESGKNLPKLCFASPEYLIELMQEKVDNPMEFSRVLKAAFQSRGNNPLKINVSHLYGLWPILCMATLIVTIHIFYNNLISGENSYSKLSLVDLAGSEGLISEDDSGERVTDMLHVMKSLSALGDVLSSLTSKKDVIPYQNSVLTKLFVDSLGGSSKSLMIVNVCPNSSNLSETLLSLNFSARARNSVLSLGNRDTIKKWRDVANDSRKELYEKEKEIQDLKQDGLRLKQALRDANDQCVLLFNEVQKAWKVSSALQTDLQAEHILLADTYKAEKEENSQLRNQVAHMLQLEKAQNLQIQQRDSTIKSLEYYNCNCAIHLSSAVVCGMALLIMACHLSFVIYMATVAKIGSLEIQLNEALRSSNTRLNVVPETVSGAIPNSRTTGDRLHVENEKLFDKLTEKASLAGSPKLSSPLSRGSINVEPGNVGSTTARARSMDVLPSTFVTDKNDGTVALVKSGSERVKTTPAGEYLTAALNDFNPDQYEGLAAISDGANKLLMLVLAAVIKAGASREHEILAEIRDAVFSFIRKMEPRQVMDTMLVSRVRILYIRSLLARSPELQSIKVLPVECFLEKANTGPSRSSSRASSPGRSSVQYVDEQIQGFKVNIKPEKKSKFSSVVLKIRGIDEETWRQQVTGGKLREISEEAKSFAIGNKALAALFVHTPAGELQRQIRSWLAEKFDFLSIMGNDATGGTNGQLELISTAIMDGWMAGLGSALSPQTDALGQLLFEYSRRVYTSQLQHLKDIAGTLATEEAEDAAQVAKLRSALESVDHKRRKILQQMRSDVALLTLENGGSPVQNFSTAAEDARLASLISLDRILKQVKDITKLSTVNTIEKSKKRTVLGSLDKLTEQMSSLLEIDHPCAQRDIADARRVVESIPEEDDRIQNLSHSRMPSTDTGSGSGTDVAQWNVLQFNTGNTSSFIIKCGANSNSELIIKAEARVQEPKGGEIVRVAPRPSILENLSLEEMKQVFAELPEALRLLALARTADGTRARYSRLYRTLAMKVPSLRDLVSELEKGGALKDVRT 1084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03610 1084 Coils Coil 326 346 - -
Vimu7g03610 1084 MobiDBLite consensus disorder prediction 631 649 - -
Vimu7g03610 1084 Pfam Kinesin motor domain 9 241 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu7g03610 1084 ProSitePatterns Kinesin motor domain signature. 142 153 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vimu7g03610 1084 PRINTS Kinesin heavy chain signature 192 213 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu7g03610 1084 PRINTS Kinesin heavy chain signature 143 161 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu7g03610 1084 MobiDBLite consensus disorder prediction 936 959 - -
Vimu7g03610 1084 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 278 IPR027417 -
Vimu7g03610 1084 Coils Coil 259 293 - -
Vimu7g03610 1084 SMART kinesin_4 1 250 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu7g03610 1084 MobiDBLite consensus disorder prediction 630 649 - -
Vimu7g03610 1084 Gene3D Kinesin motor domain 4 286 IPR036961 -
Vimu7g03610 1084 ProSiteProfiles Kinesin motor domain profile. 1 242 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu7g03610 1084 MobiDBLite consensus disorder prediction 462 483 - -
Vimu7g03610 1084 PANTHER KINESIN-LIKE PROTEIN KLP-3 750 1027 IPR027640 GO:0003777|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03610 Vimu-Chr7 30965188 30990593 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03610 9 243 Calmodulin-binding Proteins AT5G65930 31.799 8.60e-21 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03610 - - gmx:100810330 1730.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03610 7 30965188 30990593 Vimu7g03610 7 30965188 30990593 PCT