Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03607 ATGTTTGTTGAAATAGGTAGTTTGAAAAGTACAACGTTTTCTCCAGATGCTGGTGTTCTTAACTGGGAGTTGCCTATCTTATGTTTGATCTTATGCAACGTCACGTGGATCATGAAGGAGATACTTGAAAGGCATCATTTGCACTCAAAGAACCTAGCAAAGATGGAACAGCCATCTCTCGAGTTGCAGCTGGTTGAAAACAGCAACTGCACCAGATTGAGCAAGGAAGTTGCCGAGAAGAGCCATCAACTGAGGCAGCTAAGAGGAGAGGATCTTCAGGGTCTAAACATAGATGAATTGCAACAGCTGGAGAGGTCTCTAGAAACTGGATTGGGGCGTGTGATAGAAAAGAAGGGAGAGAAAATTATGGAAGAGATAGCTGATCTCCAAAGAAAGGGAATGGTATTGATGGAAGAGAACGAGCGACTAAAACATCACGTGGCGGGCATGGTTAGTCAAAGACGTGGTGGTGTGGAATCTGAGAACTTTGTTATGGATGAAGGTCATTCTTCAGAGTCTGTCACCTACGTTTGCAATTCTGCAGGACCTCCGCAGGACTATGATGAAAGCTCAGATACGTCCCTCAAACTGGGGTTACCATACTCCGGTTGA 612 0.4477 MFVEIGSLKSTTFSPDAGVLNWELPILCLILCNVTWIMKEILERHHLHSKNLAKMEQPSLELQLVENSNCTRLSKEVAEKSHQLRQLRGEDLQGLNIDELQQLERSLETGLGRVIEKKGEKIMEEIADLQRKGMVLMEENERLKHHVAGMVSQRRGGVESENFVMDEGHSSESVTYVCNSAGPPQDYDESSDTSLKLGLPYSG 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03607 203 Coils Coil 70 90 - -
Vimu7g03607 203 Pfam K-box region 68 147 IPR002487 GO:0003700|GO:0005634|GO:0006355
Vimu7g03607 203 ProSiteProfiles K-box domain profile. 63 157 IPR002487 GO:0003700|GO:0005634|GO:0006355
Vimu7g03607 203 MobiDBLite consensus disorder prediction 174 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03607 Vimu-Chr7 30897788 30900584 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03607 23 203 MADS-box Gene Family AT2G22540 55.288 2.98e-66 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03607 - - gmx:100789126 287.345