Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03578 ATGACTTATCTTGAAATGGTTATCAGATTGGAGATAAAACAAGCTTCTGAAGGATTTCATCATGTTCCTGGTGTAGTAGAAGCCAAAATTGATAGCATAAATGAAGTGTGGAGTGTATTGCAGACCGGAAATAATGCTAGAGCAGTTGGAAATAACAACGTTAATGAGCATAGCAGTCGATCTCATTGCATGCTATGTATAACAGTAAAGGCTAAAAACTTGTTGAGTGGAGACTGTACCAAGAGCAAGCTTTGGCTCGTGGATTTGGCAGGTAGTGAGAGACTTGCAAAGACTGATGCTCAAGGGGAACGACTTAAGGAAGCACAAAATATTAATCGATCTCTTTCTGCTCTTGGAGATGTAATATCTGCTTTGGCAGCTAAAAGTAGTCACATTCCATATAGGAACTCTAAACTAACACATTTACTTCAAGACTCACTAGGAGGTGACTCCAAAACTCTGATGTTTGTACAAATAAGTCCATCAGACCAGGACCTAGGTGAGACCCTGAGCTCGCTTAATTTTGCAACTAGAGTGAGGGGTGTTGAGTTAGGCCCTGTTAAGAGGCAAATTGATACAAGTGAACTTCAAAAGTTGAAAGCAATGCTCGAAAAAGCACGGAGTGATTGCAGAATTAAAGATGAATCTATGCGAAAACTTGAAGAAAATTTGCAAAGCTTGGAGAGTAAGGCCAAAGGCAAGGACCAGATTTACAAAAATTTACAAGAAAGGATTAAAGAACTTGAAGGACAGATTGAGTTGAAGAAAGTCATGCAAAGTGAATCAGACAAACAAGTCTCTCAATTATCTGACAAATTGAGAGGGAAAGAAGAAACCTGCAGTTCTCTCCAACAAAAGGTGAGAGAGCTAGAGAAAAGGATGAAAGAACAACTGCACTCAGAGTCAGCAAGTTTTCAACAGAAGGTTTGGGATCTAGAGAAAAGGCTGAAAGATCAGATGCAAGAGTCTGACTCTGAATCTGCCATTTTGAAAGATAAGATAAAGGAGCTTGAAAGGAAACTGAAAGAGCAGGAGAAGAGCTCAATGGCCATGCTTCATCAACAGATGAAGGAACTAGAGGACAGATACAGAGAGCGAGAGCAACAGTGGCAACAAACACAAAGTTATGTGGATGCAGTAAGGGCCACACCAGATATAGGTAAAAGCTTCATGAATGAAGAATGTTCAAGCGAGATTGAGGCTGGCATTTTAAGGTGTTCAGACTCAGTAAACCGCCAGGCAAGCCAAGGTTCTTCTTTGTTCAAAGGGAATGATTCTACTAATAATAAGATAAGAAGCAGAACAAGAGAGTTCAGAAGCAATGATGAAAACAACATTGTCATGTCTTCATCATCATTGCACGATAGAAGAGTCATAAGGAAATCTGATCCACCCAAAATAATGAGGAGTGTAAGGCCAACACCAAGACCAGCCACTGCTAATCAAGCTCCAGTTTCTCACAAGAGAACTAGCACAAGCAGAGATCAGATTCAAGGAATAAGAGAGAGGGAAAGTAAGAAGAAAATTTGGAGTAGATAG 1539 0.4009 MTYLEMVIRLEIKQASEGFHHVPGVVEAKIDSINEVWSVLQTGNNARAVGNNNVNEHSSRSHCMLCITVKAKNLLSGDCTKSKLWLVDLAGSERLAKTDAQGERLKEAQNINRSLSALGDVISALAAKSSHIPYRNSKLTHLLQDSLGGDSKTLMFVQISPSDQDLGETLSSLNFATRVRGVELGPVKRQIDTSELQKLKAMLEKARSDCRIKDESMRKLEENLQSLESKAKGKDQIYKNLQERIKELEGQIELKKVMQSESDKQVSQLSDKLRGKEETCSSLQQKVRELEKRMKEQLHSESASFQQKVWDLEKRLKDQMQESDSESAILKDKIKELERKLKEQEKSSMAMLHQQMKELEDRYREREQQWQQTQSYVDAVRATPDIGKSFMNEECSSEIEAGILRCSDSVNRQASQGSSLFKGNDSTNNKIRSRTREFRSNDENNIVMSSSSLHDRRVIRKSDPPKIMRSVRPTPRPATANQAPVSHKRTSTSRDQIQGIRERESKKKIWSR 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03578 512 PRINTS Kinesin heavy chain signature 52 69 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu7g03578 512 PRINTS Kinesin heavy chain signature 83 101 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu7g03578 512 PRINTS Kinesin heavy chain signature 132 153 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu7g03578 512 SMART kinesin_4 1 190 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu7g03578 512 Coils Coil 203 258 - -
Vimu7g03578 512 Gene3D Kinesin motor domain 5 183 IPR036961 -
Vimu7g03578 512 ProSiteProfiles Kinesin motor domain profile. 1 182 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu7g03578 512 Coils Coil 266 300 - -
Vimu7g03578 512 MobiDBLite consensus disorder prediction 475 493 - -
Vimu7g03578 512 MobiDBLite consensus disorder prediction 494 512 - -
Vimu7g03578 512 MobiDBLite consensus disorder prediction 414 512 - -
Vimu7g03578 512 Gene3D - 184 350 - -
Vimu7g03578 512 Coils Coil 320 369 - -
Vimu7g03578 512 MobiDBLite consensus disorder prediction 414 428 - -
Vimu7g03578 512 Pfam Kinesin motor domain 10 181 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu7g03578 512 ProSitePatterns Kinesin motor domain signature. 82 93 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vimu7g03578 512 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 218 IPR027417 -
Vimu7g03578 512 PANTHER KINESIN-LIKE PROTEIN KLP-3 9 276 IPR027640 GO:0003777|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03578 Vimu-Chr7 30505820 30512503 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03578 8 236 Calmodulin-binding Proteins AT5G65930 43.668 1.31e-48 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03578 K10406 - gmx:100800016 824.698