Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03526 ATGGTGAATATCAGATTGCAAGCACAAAGTACATTAGCTGGCACTGGAGCAGCTACCGTGGCAGTGAAATATGGGGGACCCATGGATGTAGCCAGGCAAGTTCTCAGGTCAGAAGGGGGCATAAGAGGTCTGTTCAAGGGCATGGTTCCCACTATGGCTCGTGAAGTACCTGGCAATGCTGCATTGTTTGGTGTATATGAAGCACTAAAGCAATTACTTGCTGGTGGCACTGATACCTCGGGACTGGATAGAGGTTCTCTGTTGCTTGCTGGAGGCTTGGCTGGAGCTGCATACTGGCTCGCAGTTTACCCAACTGATGTTGTCAAGAGTGTGATTCAAATAGATGATTACAAAAACCCGAAGTTCTCTGGTTCAATTGATGCTTTCAGAAGAATTTCAGCTACTGAGGGGTTCAAAGGCCTATATAAGGGTTTTGGACCAGCAATGGCTCGAAGTGTTCCTGCCAATGCAGCTTGCTTCTTGGCATATGAGATGACAAGATCAGCTCTTGGATGA 516 0.4729 MVNIRLQAQSTLAGTGAATVAVKYGGPMDVARQVLRSEGGIRGLFKGMVPTMAREVPGNAALFGVYEALKQLLAGGTDTSGLDRGSLLLAGGLAGAAYWLAVYPTDVVKSVIQIDDYKNPKFSGSIDAFRRISATEGFKGLYKGFGPAMARSVPANAACFLAYEMTRSALG 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03526 171 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1 72 IPR018108 -
Vimu7g03526 171 SUPERFAMILY Mitochondrial carrier 2 164 IPR023395 -
Vimu7g03526 171 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 2 170 - -
Vimu7g03526 171 Gene3D Mitochondrial carrier domain 1 171 IPR023395 -
Vimu7g03526 171 ProSiteProfiles Solute carrier (Solcar) repeat profile. 82 169 IPR018108 -
Vimu7g03526 171 Pfam Mitochondrial carrier protein 88 170 IPR018108 -
Vimu7g03526 171 Pfam Mitochondrial carrier protein 2 74 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03526 Vimu-Chr7 29990542 29991057 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03526 1 170 Antiporters AT1G79900 35.088 1.16e-27 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03526 K15109 - gmx:100787332 280.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03526 7 29990542 29991057 Vimu7g03526 7 29990542 29991057 ECH