Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03510 CCCCACTCTTCTCCACTTCTCAAACTTCGAACTTCATCACTCTTCCCTCAAACCACAAATCACATTCTCTCCAAACAAACTCTCCCTCCGACCAACATGGCAATTGAAAACCATGACACTGCTGTCAGAGAAATCAAGCCCAAGAACAGGAGAATCATGGGTGCTGGAGGTCCTGATGATGAGGACAATAGGTGGCCGCCATGGTTGAAGCCACTGCTCAAAGAGAGCTTCTTTGTTCAATGCAAGTTACATGCTGATTCTCACAAGAGTGAATGCAACATGTATTGCTTGGACTGTATGAACGGCCCTCTCTGCTCTCTCTGCCTCGCCCACCACAAGGATCACCGTGCAATCCAGATTAGGAGGTCCTCATACCATGATGTGATCAGGGTTTCTGAGATTCAGAAGGTGTTGGACATCACTGGTGTCCAAACCTACATTATCAACAGCGCAAGGGTGGTGTTTTTGAACGAGAGGCCTCAGCCAAGGCCAGGAAAAGGGGTCACAAACACATGTGAAGTCTGCGAGCGAAGCCTTCTTGATTCTTACCGCTTCTGTTCACTTGGTTGCAAGATTGTTGGAACATCTAAGAACCCACAGAAGAAGAAGAAGCAGTCAACGGCAATGTCATCAGATTCTGAGGATTCATACAGTAGCAACAGCGTCCATGGCCTGCAGAAAAACTGCAAAGTTCAGAGCTTCACACCGTCCACTCCACCTCCAACTTCGGTTAATTACAGAACTGCCAAGAGAAGAAAGGGAATACCGCACCGAGCCCCAATGGGGGGACTAATCATAGAGTATTAG 807 0.4783 PHSSPLLKLRTSSLFPQTTNHILSKQTLPPTNMAIENHDTAVREIKPKNRRIMGAGGPDDEDNRWPPWLKPLLKESFFVQCKLHADSHKSECNMYCLDCMNGPLCSLCLAHHKDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSYRFCSLGCKIVGTSKNPQKKKKQSTAMSSDSEDSYSSNSVHGLQKNCKVQSFTPSTPPPTSVNYRTAKRRKGIPHRAPMGGLIIEY 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03510 268 MobiDBLite consensus disorder prediction 199 245 - -
Vimu7g03510 268 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 59 261 - -
Vimu7g03510 268 MobiDBLite consensus disorder prediction 196 262 - -
Vimu7g03510 268 Pfam PLATZ transcription factor 121 192 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03510 Vimu-Chr7 29764577 29766362 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vimu7g03510 PLATZ 9.3e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03510 - - gmx:100797900 459.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03510 7 29764577 29766362 Vimu7g03510 7 29764577 29766362 ECH
Vimu7g03510 7 29764577 29766362 Vimu7g03510 7 29764577 29766362 PCT