Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03504 ATGGCTCCTTCTTTCGACACAAACACTCAAACAGTTTGCGTCATGGACGCTTCCGGCCAACTAGGTTTCAGCCTCGTCCAGAGACTCCTCCAACGAGGCTACACCGTCCATGCCTCTCTCCAAAAATATGGGGATGAAGACCTATTCAATGGGATTTCCACAGACTCTAATAAGCTCAAGATTTTTCGATCTGACCCATTCGATTACCATAGCATAATCGAGGCACTCCGAGGCTGCTCTGGTTTGTTCTACACGTTCGAACCTCCCCATGACCAACCAAATTATGACGAATACATGGCAGACGTGGAAGTAAGAGCTGCACACAACGTGTTGGAAGCCTGTGCCCAGACAGAGACAATGGATAAAGTGGTTTTTACTTCCTCAGCAACCGCAGTAGTTTGGAGAGAGGATCGCAAGACCATGGAACTGGATCTGGATGAGAGACATTGGAGTGATGTTAATTTCTGTCGCAAATTCAAGTTATGGCACGGTGTGTCGAAGACAATGGCTGAGAAAAGTGCGTGGGCCTTAGCAATGGACAGAGGAGTGAATATGGTGTCCATTAACGCTGGCTTATTGATGACTCATGATCTCACAATCCAACACCCTTACCTCAGAGGAGCTGCTGAGATGTACGAGGATGGTGTTTTCGTCACCGTTGATTTACCTTTCTTGGTGGATGCCCACATCTGCGTATTCGAAGAAGTCTCATCCTACGGTCGTTATTTGTGTTTTAATCACATCATCAACACCCAAGAAGACGCCGTCCAGTTAGCTCAAAAGTTGACTCCAGCTGCTGGTTCTTCCTCTTCGTCTTCATCCTCCCCATCGCCGCAAAGTGGTGACCTCGGTAAGGGTTTTATCGAACAGAAAATTAGCAACAAGAAGTTGAACAAATTGATGGTAAACTTCGAAGCTTGA 921 0.4669 MAPSFDTNTQTVCVMDASGQLGFSLVQRLLQRGYTVHASLQKYGDEDLFNGISTDSNKLKIFRSDPFDYHSIIEALRGCSGLFYTFEPPHDQPNYDEYMADVEVRAAHNVLEACAQTETMDKVVFTSSATAVVWREDRKTMELDLDERHWSDVNFCRKFKLWHGVSKTMAEKSAWALAMDRGVNMVSINAGLLMTHDLTIQHPYLRGAAEMYEDGVFVTVDLPFLVDAHICVFEEVSSYGRYLCFNHIINTQEDAVQLAQKLTPAAGSSSSSSSSPSPQSGDLGKGFIEQKISNKKLNKLMVNFEA 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03504 306 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 264 IPR036291 -
Vimu7g03504 306 CDD FR_SDR_e 12 302 - -
Vimu7g03504 306 Gene3D - 4 306 - -
Vimu7g03504 306 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 10 272 - -
Vimu7g03504 306 FunFam Cinnamoyl-CoA reductase-like SNL6 isoform A 4 306 - -
Vimu7g03504 306 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 14 172 IPR002225 GO:0003854|GO:0006694|GO:0016616
Vimu7g03504 306 MobiDBLite consensus disorder prediction 265 281 - -
Vimu7g03504 306 MobiDBLite consensus disorder prediction 265 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03504 Vimu-Chr7 29719497 29721850 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03504 10 264 Monolignol Biosynthesis Gene Families AT2G02400 32.967 4.54e-38 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03504 - - pvu:PHAVU_002G140100g 575.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03504 7 29719497 29721850 Vimu7g03504 7 29719497 29721850 ECH