Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03450 ATGGTTGATGAACCATCTCAAAATGGCACTTCAGCATATACTCCTCAAAATGGGAGCCTAAGTGCACCTCCTACTGCGGTCAATCAAACTCTGCCTATCATACCTATCTCTGCAGGTGGTGCTCCTGGAGCTGTTCCTGGTCCCACAACAAACTTAAATATAGGAATGGATTATTGGGGTACACCAGCTTCTTCCAACATTCCTGCACTTGCTAGAAAGGTTCCATCTACTGCAGTTGCTGGATCACGGGATAGTGTTCAATCACAACTCTGGCTTCAGGTAACTTTTGACTACAGACTGATGATATGA 309 0.4498 MVDEPSQNGTSAYTPQNGSLSAPPTAVNQTLPIIPISAGGAPGAVPGPTTNLNIGMDYWGTPASSNIPALARKVPSTAVAGSRDSVQSQLWLQVTFDYRLMI 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03450 102 MobiDBLite consensus disorder prediction 1 26 - -
Vimu7g03450 102 Pfam Disordered region downstream of MFMR 4 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03450 Vimu-Chr7 29156833 29157348 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03450 6 99 bZIP Transcription Factor Family AT2G35530 51.020 7.72e-23 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03450 K09060 - gmx:778122 145.591
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03450 7 29156833 29157348 Vimu7g03450 7 29156833 29157348 ECH
Vimu7g03450 7 29156833 29157348 Vimu11g00933 11 9686115 9692632 PCT