Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03415 ATGGCTGAGAGTGCAGTGGGTTTTCTTCTTCAAAGGCTTGCCCCTGTTTTTGAGAATAAGGTGAAATTGTTTACTGGAGTTCAAGCAGAAGTGATATGCCTGAAAGGACAGTTGGAGCTAATAAGATCCTTCTTAAGGGTTGCAGATGCGTTAGAAGAGAGCGACGATGAACTTAAAGTTTGGGTTAAGCAAGTGAGAGATGTTGTTCATGAGGCCGAAGATCTTCTTGATGAATTGGAACTTGTCCAGGTACATAACCATACCAATGGATTCTCTATTTATCTCCGTATCAGAAATATGAAAGCTCGCTATCGGATTGCACATGACTTAAAAAGCATCAACTCCCGCTTGAAAGCTATTTCTTCAAGTCGTAAGAGATTCCTCAGTAAACTGGACTCTTCTTCTTCAGTGGCTTCAAATTCCATTAATACAGGTAACGCATGGCATGATCAACGAGGAGATGCTCTTCTCCTGGACAACACTGATCTAGTGGGCATAGACAGGCCAAAAAAACAGGTTATAGGATGGTTGATCAATGGTTGTCCTGGACGAAAAGTGATTTCTGTTACTGGAATGGGAGGAATAGGAAAAACTACTTTGGTGAAGAAAGTATATGATGATCCAGATGTAAAAAAAAACTTCAAAGCTTGTGCTTGGGTCACTGTTTCTCAATCTTGTAAAATTGAGGAGCTTCTCAAAGACTTGGCCAAGAAGCTCTTTTCTGAGATAAGGCGACCAATTCCAGAGGGAATGGAAAGCATGTGTAGTGATAAGCTCAAAATGATGATCAAAGACTTGCTGCAGAGAAAGAGTTATCTAGTAGTGTTTGATGATGTGTGGCATATGTATGAATGGGAAGCTGTCAAATATGCATTGCCAAACAACAATTGTAGTAGCAGGATCATGATCACCACTCGTAGATCTGATTTAGCCTTTACCTCCACAATAGAATCCAACGGTAAAGTGTATAACTTGCAACCCTTGAAACAAGATGAGGCTTGGGATCTATTTTGTAGGAACACCTTTCAGGGTGATTCATGTCCCTCATATTTGATTGACATCTGTAAATATATCTTAAGAAAATGTGAGGGTCTTCCCCTTGCAATTGTAGCAATCAGTGGTGTCCTGGCCACAAAAGACAAACGCAGGATTGATGACTGGGGTATGATTTGCCATAATCTTGGAGTTGAAATTCAAGGCAATGGCAAACTCGATAATTTTAAAACTGTACTCAACCTCAGTTTTAATGATTTACCTTACCATTTAAAATACTGTTTCTTGTACTTAAGCATCTTTCCTCAGGACTATCTGATTCAGCGCATGAGATTGATTCGCTTATGGATAGCAGAAGGTTTTATTGAAGCCAAAGAAGGAAAAACAAAGGAAGATGTTGCACATGATTACCTGAAGGAGCTCCTGAACAGAAACTTAATACAAGTAGCAGGTACAACAACTGATGGAAGGGTCAAAACTTTGCGAGTCCATGATCTTCTACGGGAGATCATCATTTTGAAGTCTAAAGACCAAAACTTTGCATCCATTGTCAATGAACAAAGTGCGGCATGGCCAGAAAAGATTCGGCGGCTTTCAGTGCACGGCACATTACCATATCGGCAGCAACATAGGTCTGTCTCTCAACTCCGTTCTTTTTTAATGTTTGGGGTTGGAGAATATATACCCCTTGGAAAGCTGTTCCCAAGTGGTTTTAAACTGCTTAGTGTTTTAGATTATCAAGATGCACCTTTGAAGAAGTTTCCACTGGCAGTTATTGATCTATATCATTTAAGATATCTAAGCTTAAGGAACACAAAGGTGAAAACAGTTCCAGGTCACATAATAGGGAAGTTGCATAATCTAGAAACACTGGATCTAAAGAAGACTTCTGTCAGAGAATTGCCTGTAGATATTCTCAAGCTTCAAAAGCTTCGTCATCTCCTTGTCTATCAGTTGAAATTCAAAGGCTATGCACAGTTTGACTCCAAAGATGGTCTTAAGGCTCCCTCTGAAATAGGAAAATTAAAGTCATTACAAAAGCTTTGTTTTGTGGAGGCAAACCAAGATTGTGGAATGATAATAAGGCAGTTAGGGGAGCTAAGTCAACTAAGAAGGTTGGGAATCTTGAAACTTAGAGAGGAAGATGGGATGGCTTTCTGTTTGTCCATTGAGAGATTAACTAATCTTCATGCCCTCGCTGTTGCTTCTGAGGGTGAGAGTAAAGTCATCGATCTGACATTTCTCTGTTCACCACCTCCATTTCTTCAACGCTTGTATTTGTCAGGGCGTCTACAAGAGTTACCAAGTTGGATACAGTCTCTTCATAGCCTAGCCAGGTTATTTCTGAAATGGAGCTGTTTAAAATACGACCCTCTAGTGTATCTGCAAGATCTTCCAAACCTTGCACATCTTGAACTACTTAAGGTTTATGATGGTGACACTTTGCATTTTAGGAGTGGAAAGTTCAAGAAGCTCAAGGTTTTAGGTCTTGACAAATTTGACGGACTCAAAGAGGTGACAGTGGGGAAGGATGCAATGAACTGCCTAGAAAAACTGAGCATAGGGCGGTGTGAATTGTTGAAGAAGGTTCCGTCAGGCATTGAGAATTTAACTAAGTTGAAAGTCCTTGAGTTTTTCGATATGCCAGATGAACTGATGAAGACAATATGTCCACATGGTCCCGGAAAAGATTACTGTAAAGTTTTACATATTCCAAATGTCTATTCTACCTACTGGAGAGATGGAGGTTGGGATGTTTATGCTCTGGACACTTTCAGCAGAGATTGTTCTCCTAGATCAGGCACTCTCATAAGAAGTCATGAACCTCGTATTCAGTGGAAGGTGTAG 2841 0.4023 MAESAVGFLLQRLAPVFENKVKLFTGVQAEVICLKGQLELIRSFLRVADALEESDDELKVWVKQVRDVVHEAEDLLDELELVQVHNHTNGFSIYLRIRNMKARYRIAHDLKSINSRLKAISSSRKRFLSKLDSSSSVASNSINTGNAWHDQRGDALLLDNTDLVGIDRPKKQVIGWLINGCPGRKVISVTGMGGIGKTTLVKKVYDDPDVKKNFKACAWVTVSQSCKIEELLKDLAKKLFSEIRRPIPEGMESMCSDKLKMMIKDLLQRKSYLVVFDDVWHMYEWEAVKYALPNNNCSSRIMITTRRSDLAFTSTIESNGKVYNLQPLKQDEAWDLFCRNTFQGDSCPSYLIDICKYILRKCEGLPLAIVAISGVLATKDKRRIDDWGMICHNLGVEIQGNGKLDNFKTVLNLSFNDLPYHLKYCFLYLSIFPQDYLIQRMRLIRLWIAEGFIEAKEGKTKEDVAHDYLKELLNRNLIQVAGTTTDGRVKTLRVHDLLREIIILKSKDQNFASIVNEQSAAWPEKIRRLSVHGTLPYRQQHRSVSQLRSFLMFGVGEYIPLGKLFPSGFKLLSVLDYQDAPLKKFPLAVIDLYHLRYLSLRNTKVKTVPGHIIGKLHNLETLDLKKTSVRELPVDILKLQKLRHLLVYQLKFKGYAQFDSKDGLKAPSEIGKLKSLQKLCFVEANQDCGMIIRQLGELSQLRRLGILKLREEDGMAFCLSIERLTNLHALAVASEGESKVIDLTFLCSPPPFLQRLYLSGRLQELPSWIQSLHSLARLFLKWSCLKYDPLVYLQDLPNLAHLELLKVYDGDTLHFRSGKFKKLKVLGLDKFDGLKEVTVGKDAMNCLEKLSIGRCELLKKVPSGIENLTKLKVLEFFDMPDELMKTICPHGPGKDYCKVLHIPNVYSTYWRDGGWDVYALDTFSRDCSPRSGTLIRSHEPRIQWKV 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03415 946 Gene3D - 157 317 IPR027417 -
Vimu7g03415 946 Gene3D - 415 505 IPR036388 -
Vimu7g03415 946 Pfam NB-ARC domain 169 416 IPR002182 GO:0043531
Vimu7g03415 946 FunFam Probable disease resistance protein At1g61300 154 319 - -
Vimu7g03415 946 Gene3D - 327 414 IPR042197 -
Vimu7g03415 946 FunFam Probable disease resistance protein At1g63360 415 504 - -
Vimu7g03415 946 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 429 IPR027417 -
Vimu7g03415 946 Gene3D - 4 107 - -
Vimu7g03415 946 SUPERFAMILY L domain-like 493 882 - -
Vimu7g03415 946 PANTHER DISEASE RESISTANCE PROTEIN RP 42 856 IPR044974 GO:0006952
Vimu7g03415 946 CDD RX-CC_like 2 122 IPR038005 -
Vimu7g03415 946 Gene3D Ribonuclease Inhibitor 546 890 IPR032675 -
Vimu7g03415 946 PRINTS Disease resistance protein signature 186 201 - -
Vimu7g03415 946 PRINTS Disease resistance protein signature 362 376 - -
Vimu7g03415 946 PRINTS Disease resistance protein signature 614 630 - -
Vimu7g03415 946 PRINTS Disease resistance protein signature 266 280 - -
Vimu7g03415 946 Coils Coil 62 82 - -
Vimu7g03415 946 Pfam Rx N-terminal domain 5 87 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03415 Vimu-Chr7 28802923 28805938 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03415 185 809 WRKY Transcription Factor Family AT5G45050 22.693 9.51e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03415 K13457 - gmx:100805346 1630.54