Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03405 ATGGCTTATGATCTGTTACAGATTGCTCCTGCTGATTTAGAAGCTGTGTTAATTTTGCATCCTGAAATAGTTGATGTTGCTGTTATAGGTGCTACGGATGAAGAAACTGGTGAAATTCCAGTGGCATTTGTGGTAACGAAGGTTGGAAGTGTGCTATCTCCGAAGCATGTTATGGATTATGCTGCTGAGCAGGTTGCTCCATATAGGAAGATTAGGAAAGTGTTCTTCACCAACAAGATACCAAGGTCTGCGAGTGGGAAGATCCTAAGAAAGCAACTGAGGAATTGCTTGACTTCTAAACTATGA 306 0.415 MAYDLLQIAPADLEAVLILHPEIVDVAVIGATDEETGEIPVAFVVTKVGSVLSPKHVMDYAAEQVAPYRKIRKVFFTNKIPRSASGKILRKQLRNCLTSKL 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03405 101 Gene3D - 3 100 IPR045851 -
Vimu7g03405 101 SUPERFAMILY Acetyl-CoA synthetase-like 7 97 - -
Vimu7g03405 101 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 3 95 - -
Vimu7g03405 101 Pfam AMP-binding enzyme C-terminal domain 13 87 IPR025110 -
Vimu7g03405 101 FunFam 4-coumarate--CoA ligase 2 1 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03405 Vimu-Chr7 28690812 28691748 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03405 3 101 Monolignol Biosynthesis Gene Families AT4G19010 58.586 6.67e-33 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03405 K01904 - gmx:100804808 162.54