Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03387 ATGATTGGCATGGCTTCTTCAAGCTCTCTCTTGAGGATGGAAGAAATAGCAGGGAAAGGAAGAGGTCTTGTTGCAGAAAAATCCCTGAAAGCAGGTCAAATAATTCTCACTGAATCCCCTCTCATTCTCTACTCGGCTTCTCCTCTCTATGCACCATCTTCTTCACCTTTCACCAACTGTGATCACTGCTTCAGAATCTTACCCTCTCACACAACCATTTTCCGATGCCCCTCTTGCTCCCACCATACTTTCTGCTCCCAAAGGTGTCTCTCCCTTGCACAAAACTCCTCACACTCCAATTGGGTATGCAAAGCTCTCATCTTTCTTCGTCAACACCCCAACTCAACACTCCTTCAACAACACCCTCCAGAACGCCAAGTTCAAGCTCGTTTCATTGTAGCTTCTCACAACCTCTTCCTTCAATCCCCTTCTCAACTTCACACTTTCCTCTCTCTTCATGGCACTCCAGATACTGCCCTTTTTGATGTTGCAAACTTTCTCCATTCTCTAATCTCACCTCTTTTCCCACCCGAGGGTCAACTTTCTGTAGATCTCACTGCACAACTTCTTGCAAAGGACAGACTCAACTCCTTCTGCTTAATGGACCCTTATTCCCCAGATGGGCCTCAGAGATCCATCAAAGCTTATGCTATTTACCCCAAAGCCACGTTCTTCAACCATGATTGTGTTCCCAACGCCTGCAGATTCGATTATGTGGACACTGGTGATGAACACAACACTGACATTGTTTTTAGGTTGATCGAGGATGTTCCTGCTGGGAAAGAGATCTGCATCAGCTATTTCAGGATTGGAAGGGATTATTGCACCAGAAAAAGGATCTTGATGATTATGGCTTCACTTGTGGATGTGATAGGTGCAGGATCGAAGCAAATTGGGGAGAAAACCAGGGGGAGATGA 918 0.4575 MIGMASSSSLLRMEEIAGKGRGLVAEKSLKAGQIILTESPLILYSASPLYAPSSSPFTNCDHCFRILPSHTTIFRCPSCSHHTFCSQRCLSLAQNSSHSNWVCKALIFLRQHPNSTLLQQHPPERQVQARFIVASHNLFLQSPSQLHTFLSLHGTPDTALFDVANFLHSLISPLFPPEGQLSVDLTAQLLAKDRLNSFCLMDPYSPDGPQRSIKAYAIYPKATFFNHDCVPNACRFDYVDTGDEHNTDIVFRLIEDVPAGKEICISYFRIGRDYCTRKRILMIMASLVDVIGAGSKQIGEKTRGR 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03387 305 Gene3D SET domain 22 281 IPR046341 -
Vimu7g03387 305 ProSiteProfiles SET domain profile. 9 268 IPR001214 GO:0005515
Vimu7g03387 305 SUPERFAMILY SET domain 9 268 IPR046341 -
Vimu7g03387 305 SMART set_7 9 274 IPR001214 GO:0005515
Vimu7g03387 305 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 5 282 IPR044238 -
Vimu7g03387 305 Pfam SET domain 20 267 IPR001214 GO:0005515
Vimu7g03387 305 Gene3D - 59 119 - -
Vimu7g03387 305 Gene3D - 120 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03387 Vimu-Chr7 28538388 28539966 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vimu7g03387 SET 2e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03387 - - gmx:100808530 449.899