Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03385 ATGGTACTGAAGTTTTCAGGTTCTTACAAGCAGTGCAGACCTTGCACAGGGTCCAGTGCCTACAAGAAAGGACAGAGGCCATATCCTGACTTTGACACCATTTCAGAAGGGGTTCCATACCCCTATATCGGAGGAGCAAGCTCAACTTCAACCCCTGCTTGGGACTTCACAAGCTCCTATATCCCTGGTGGTAGATCAGACCAAAGATTTATGGGTGGTTTGAATGGTGATAGGACCTCTAGAGGCCCTGAATCAGCACCAGCATGTGATGTTGTTGCTGAGGAAGAGGATGAAACCAAGGAGTGGATGGCACAGGTGGAACCAGGTGTTCACATTACCTTTGTGTCTCTTCCTAATGGGGGAAATGATCTCAAAAGAATTCGCTTCAGCCGAGAGATTTTTGACAAGTGGCAAGCTCAAAAATGGTGGGGTGAGAATTATGACAGAATCATGGAGCTTTACAATGTCCAGAGATTCAATCGACAAGCTCTTAACACTCCTTCCAGATCTGAGGATGAGCAAAGAGATTCTTCTTATTCAAGACTGACATCTGGACAAGAAAGCCCGGGGTCAATGTCGTTGAAGGAATGGACACCAAGGAATCACTATAAACCCTCATTGAATAACCAATCTGAAGCTATGGATCAAGGTGGTGGTCCAAACTTCCCAGCAGGATCATCTGTGGAAGCATCTAGGACAACCACTTCTTCTAGAGATGAGCCTTCAATGAGCAATGCTAGTGACCTGGAAGCAGAATGGATTGAGCAAGATGAACCTGGAGTGTACATCACGATCAGGCAACTAGCTGATGGAACTAAGGAGCTTCGTCGTGTCAGATTCAGCCGGGAGAGATTTGGAGAGGGGCATGCAAAGAAATGGTGGGAAGACAACAGAGAAAGAATACAAGCTCAATACCTTTGA 921 0.4615 MVLKFSGSYKQCRPCTGSSAYKKGQRPYPDFDTISEGVPYPYIGGASSTSTPAWDFTSSYIPGGRSDQRFMGGLNGDRTSRGPESAPACDVVAEEEDETKEWMAQVEPGVHITFVSLPNGGNDLKRIRFSREIFDKWQAQKWWGENYDRIMELYNVQRFNRQALNTPSRSEDEQRDSSYSRLTSGQESPGSMSLKEWTPRNHYKPSLNNQSEAMDQGGGPNFPAGSSVEASRTTTSSRDEPSMSNASDLEAEWIEQDEPGVYITIRQLADGTKELRRVRFSRERFGEGHAKKWWEDNRERIQAQYL 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03385 306 MobiDBLite consensus disorder prediction 202 216 - -
Vimu7g03385 306 MobiDBLite consensus disorder prediction 164 247 - -
Vimu7g03385 306 ProSiteProfiles BRX domain profile. 100 155 IPR013591 -
Vimu7g03385 306 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 306 IPR044532 -
Vimu7g03385 306 ProSiteProfiles BRX domain profile. 251 306 IPR013591 -
Vimu7g03385 306 MobiDBLite consensus disorder prediction 226 244 - -
Vimu7g03385 306 Pfam Transcription factor regulating root and shoot growth via Pin3 250 305 IPR013591 -
Vimu7g03385 306 Pfam Transcription factor regulating root and shoot growth via Pin3 100 154 IPR013591 -
Vimu7g03385 306 MobiDBLite consensus disorder prediction 179 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03385 Vimu-Chr7 28520067 28527356 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03385 1 306 Major Intrinsic Protein MIP AT1G31880 65.287 3.86e-139 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03385 - - vum:124826203 636.336