Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03374 ATGACTAAGCAACTTTCCAGCAATCTCAAAGCAATTCGTGCTATCCTCAGAGACGCTGAGAGAAAGCAAATAACAAGCTATGCAGTGAAGGATTGGCTGCAAAAACTCACAGATGCAGCATATGTGTTTGATGATATCTTGGATGAATGTTCAATTCACTCCACAAAGATGCACTCTGTTGATGCTCATACTTCATGCCTATCCCGTCTCCAACCTAAGGACATTCTCTTTCGCTTTCATATTGAAAAGAGGATGAAAGACATCACCCAGAGATTTCACAACATTCATGAAGAAAGGCTCACATTTGAATTGCGTGTGGGTGTCACGGAGAAGCAAACAGTGAATGATGATGATGATGATTGGCATCAAACTAGCTCAGTAATTACGGAACCCATATTCTGTGGCAGAGACAAGGATCGAGAGAAAATTGTGAAGTTTCTGTTGGAAGATGCTAGTAACAGTGAAGATTTCAGCATCTATCCCATAGTTGGTATGGGTGGACTTGGCAAAACAATTCTTGCCAAGCAGGTCTTCAATGATCACGAGATAAGTAAAAAATTTAAGTTGAGAATTTGGATCTGCGTTTCGGAAAATTTCAATGTGAAGAGAATACTGCAATCCATCATAGAATGTACCATTGGTCAAAATCCCAACCTTAGTGATTTAGAAGCAAGGCTTAAAAAGGTTGAAGAAGCATTACAAAACAAGAGGTATTTGCTTGTTCTTGATGATGTGTGGAATGAAAACACAGAGAAATGGAAGGAGTTGAAGGGGATGTTGGAGTGTGCAAGGGGAACAAAGGGAGCTACCATTTTGGTCACTACTCGACTTGAGGAAGTTGTCTCCATCATGGGAACGCATTCTGCTTACCGTTTGAAAGCATTGTCAGAAGATGACAGTTGGTCATTGTTCAAACACCATGCATTTGGACCAAACAGAGAAGAAAGGGAAGAGTTTGTAACAATTGGAAAAGAGATAATGAGGAAACGCGTTGGTTCGCCACTTGCAATCAAAACCTTGACAAGCCGTTTGCATGATGAAAGTGAGAGTATTATGGGTGAGGAATGTGTGGTTATCGAAACTTCAAGTAGGACTCTGTTGTCAGCTAGAGTTCACTATTCAAGCTTCCTTGAATCTGGCATCTCTTTTGATTTGACTGATTTCAAGCCAGGGCTCATTTCTACTTTCAAGAAAGTTGAATCTATGCGTACTTTTCTTGATTTTGGTTGTACTGGCATGGTGCCATTAAATCATTATCTCCGAGCATTATGCTTAAGATCTTCTCCTCTATTTTCCCCATTCAAGGATTTAGTACATCTGCGACATTTGAGTTTGCACTTTAGTTTACAAAGAAGCTTAGATAATTTAATTGGTCAGATGCCGAAATTGCAAATATTGAAACTGACATCTTGCCCCTTTCTTGAGCTGCTGCCCAAAACCTTGACACAGTTACAGGATTTAAGGCATGTTATGATTGATAAATGTGCTTCAATAGTAGAGCTACCTCCTAATATTAGCAAGTTAAGGTATCTAAGAACACTGGGCATTTTCGTTTCGGGTTCAAAACCAGGGTGTGGGTTAAGAGAGTTGCACCGCTTAAATTTGGGAGGCACGCTAAAAATCAAAGGCCTTGAAAACGTCCCCAATGAAAGGAATGCTAAACAAGCAAATTTTATTGGTAAGAAGGACTTGAATATCCTACATTTGTCATTGGGTGGTAAGGCTAATTCAGAAGGTAATTATGTTAGTGTGGAGAGAGTACTGGAAGCCTTGGAACCTCCCTCAACTCTCAAGAGTTTTGGGATGAATGGATATTAG 1818 0.3999 MTKQLSSNLKAIRAILRDAERKQITSYAVKDWLQKLTDAAYVFDDILDECSIHSTKMHSVDAHTSCLSRLQPKDILFRFHIEKRMKDITQRFHNIHEERLTFELRVGVTEKQTVNDDDDDWHQTSSVITEPIFCGRDKDREKIVKFLLEDASNSEDFSIYPIVGMGGLGKTILAKQVFNDHEISKKFKLRIWICVSENFNVKRILQSIIECTIGQNPNLSDLEARLKKVEEALQNKRYLLVLDDVWNENTEKWKELKGMLECARGTKGATILVTTRLEEVVSIMGTHSAYRLKALSEDDSWSLFKHHAFGPNREEREEFVTIGKEIMRKRVGSPLAIKTLTSRLHDESESIMGEECVVIETSSRTLLSARVHYSSFLESGISFDLTDFKPGLISTFKKVESMRTFLDFGCTGMVPLNHYLRALCLRSSPLFSPFKDLVHLRHLSLHFSLQRSLDNLIGQMPKLQILKLTSCPFLELLPKTLTQLQDLRHVMIDKCASIVELPPNISKLRYLRTLGIFVSGSKPGCGLRELHRLNLGGTLKIKGLENVPNERNAKQANFIGKKDLNILHLSLGGKANSEGNYVSVERVLEALEPPSTLKSFGMNGY 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03374 605 Pfam Rx N-terminal domain 3 59 IPR041118 -
Vimu7g03374 605 Gene3D - 2 94 - -
Vimu7g03374 605 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 429 516 IPR039203 GO:0050832
Vimu7g03374 605 FunFam Probable disease resistance protein At1g61300 116 289 - -
Vimu7g03374 605 PRINTS Disease resistance protein signature 159 174 - -
Vimu7g03374 605 PRINTS Disease resistance protein signature 330 344 - -
Vimu7g03374 605 PRINTS Disease resistance protein signature 232 246 - -
Vimu7g03374 605 PRINTS Disease resistance protein signature 458 474 - -
Vimu7g03374 605 Gene3D - 294 365 IPR042197 -
Vimu7g03374 605 Gene3D Ribonuclease Inhibitor 382 605 IPR032675 -
Vimu7g03374 605 Coils Coil 219 239 - -
Vimu7g03374 605 Pfam NB-ARC domain 137 346 IPR002182 GO:0043531
Vimu7g03374 605 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 118 347 IPR027417 -
Vimu7g03374 605 Gene3D - 116 290 IPR027417 -
Vimu7g03374 605 SUPERFAMILY L domain-like 415 545 - -
Vimu7g03374 605 Coils Coil 2 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03374 Vimu-Chr7 28458000 28461467 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03374 156 337 WRKY Transcription Factor Family AT5G45050 26.738 7.80e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03374 - - pvu:PHAVU_002G130400g 624.394