Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03335 ATGGCCGAAGCTTTGCTGGGATTTGTGCTTCAAAATTTGGAATCTTTTGTCCAATACCAACGTGCAACTTATTGGGGTGTTAATCAACAGACTGATAAACTGTCCAGCAACCTCACCGCAATCCGTGCTGTCCTCAGAGATGCTGAGAGAAAGCAAATTACAAGTGAACTCCTCAAGATTTGGCTGCAGAAACTTACAGATGCAGCATATGTCTTGGATGATATCTTGGATGAATGTTCAATTCACTTCACAAAGATGCACTCTCATGATGGACATACTTCATGCCTATCCCGTCTCCATCCTAATGACATTCTCTTTCGTTTCAATATTGCCAAGAGGATGAAAGACATCACCCAAAGATTTCATGACATTCATGAAGAAAGACGCACGTTTGAATTACGTGATGGTGTCACAGAGAAGCCGACAGTAGATGATGGTGAGGATGATCAAACTACCTCTGTTATAACCGAACGCAGATTCTATGGCAGAGACGATGATCAAGAGAAAATTGTGAAGGTTCTCCTAGAAGCTAATAACAATGAAGACCTCACCGTCTATCCCATAGTTGGTATGGGTGGACTTGGCAAAACAACTCTTGCCAAGCATGTCTTCCATGACGACAGGGTATGCAAACATTTTGACTTGACAATTTGGGTGTATGTTTCTGTTGATTTCAATGTGAAGGCAATACTGCAATCCATCATAGAGTATGCCACCGGACAAAACCCCAATCTCCATACTTTAGAAGCAATGGGGAAAAAGGTTGAAGAAGTGTTGCAGAGCAAGAGATATTTACTTGTTCTTGATGATGTGTGGAATGAAAACCAAGAGAAATGGAAAGATTTGGAGGGGATGTTGCGGTTTGCAAGGGGAGCAAAAGGAGCTACCGTTTTGGTCACAACTCGACTCGAGGAAGTTGCTTCCATCATGGAGACGCATCCAGCTTACCATTTGACAGAATTGTCAGAATATGACAGTTGGTCATTGTTCAAAAGCTATGCGTTTGGACCAAACAGAGAAGAGAAGAAAGAGCTTGCGGCAATCGGTGAAGACATTGTAAAAAAATGCGTTGGTTCGCCGCTTGCAATCAAAACTCTGGGAAGTCTATTGCATGATCAAACTGCGGTAACACAATGGGAAAATATAAAGGAAAGTGAGATTTGGGATATACGGAGTGAAAGTAGTTCTATGACGGGTAAGGAAAATTCTATCATGCGTGCTTTGAAATTAAGCTATTTCAATTTGGAGTTGTCATTGCGGAGATGCTTTTCTTTCTGCGCAATATTCCCCAAAGGATTTGAAATCGTTAAGGAAGAACTAATTCATCTGTGGATGGCTAATGGATTTATTAAATCTGAAGGAAATGTAGAAGTGGAGGATGTCGCCAATAATGTGTGGAGAAAATTATACCGTAGGTCATTCTTTCAAGAAGCAAAGTCTGACAAGTTTGGTACGATTACAAGTTGTAAGATACATGATCTATTTTACGATCTTGCCAAGTCTATTATGGGTGAAGAATGTGCGGCTTTTGTGGATAGAAGGTTGCCTCAATTGTCAACTAGAGTTCACTATTTATCTTATTATTATGTTCCTTTTAATCATTATTTTCGAGAATCTATGCATGTTTTCAAGAAAGTTGAATCCCTGCGGACTTTTCTTGATTTGCGGACTTTTCCTGGTAGTTTTTGCGGGGTGCCATCAAACCATTCTCTCCGAGCATTATGCACACAATCTTCTTCGTTGTCCCCACTCAAGGATTTAACACATTTGAGATATTTGAGTTTGACTTGTCATTCTAAAGCAAGCTTAAATAACTTGATTTGTCAAATGCCGAAATTGCAAATTTTGAAATTGAAAGATCCCTTTCTTAGGGGACTGCCCAAAAACTTGACGCAATTACAAGATCTAAGACATATTGTGATGGATGATTGTAAGTCAGTAGTAGAGACGCTTCCCAAAATTAGCAAGTTAAGGCATCTAAGAACACTAAGCATTTTCGTGGTGGGTTCAAAGCCAGGGTGTGGCTTAGCAGACCTAAGAATCAGAGGCCTTGAGAACGTCCCGAATGAAGGGGATGCTAAACAAGCAAATTTAATGAGCAAGAAAGAGTTGAATCGCCTACACTTGTCATGGGGTAGTAGTGCTAATTCAGAAGGTAGTAATGTTAGTGTGGAGAGAGTACTCGAAGCTCTGGAACCACCCTCAGCTCTGAAGAGTTTTGGGATGAGAGGATATCAGGGAAGACAATTATCCAATTGGATGAAAAGTGTTCTAGTTATGAGAGACTTGGTGGAAGTTGAGCTCTTGGACTGTGACAACTGTGAGGAGCTTCCCCCACTGGGTAAACTTCCACACTTGAAAATCCTATACATAAGTGAAATGAAAAATGTGAAGTGGATAGATGGTGAGACGTATGACGGTGTGGAGGAGAAGGCATTTCCATCGCTGGAGAAACTGACCGTGAGAAATTTACCAAACTTAGAGAGAATGTTGAGGGAGGAAGGAGTAGAGATGCTCCCTCGTCTTTCCAAATTAAGAATTGATGGTGTGTTGAGCTTTAAAGTCCCACGTCTTCCTTGTGTCGAGACACTTCATGCTACAGGAATTGAGGATGTGACTTCTTTCATGGAAGGGGTTGGGGAGAATATGGCTTGTCTAAAGACCTTGAGCATTTACTGCATTAAAGGAGTGGTGGTATTACCCGACGAATTCAGGAGGTTGGGTGCACTACAGGTACTATACATTGGTGAATGGTATGATCTGGAGTATTTTCCAGAACACGTGATGGAAGGTCTAACTTCTCTTCGAACTTTGTCCATTGAATTCTGTGAGAAATTGAAATCATTGTCTGAAGGTGTGGGACATTTGGCTTGTCTTGAGAGATTGACGATCAGTAAATGTCCAGAGCTGGTTCTACCAAGCAATATGAGCCAACTAACTGCCCTGCGGAAGGTTTCAATCAATTATTTCTGCACATTACCAGATGGCTTACAACGTGTCCCCTCCCTACGAGTTTTAGATATATGCGGTTGTACTTCATTGCCGGACTGGCTGGGAGACATGACTACTCTTGAAGAATTAAGCATTCGGTATTGTGACGAGTTGAGGTCACTGCCGAGTAGCATTCAACGCCTCACCAACTTGTCTCATTTAACTATACACTATTGTCCTCATCTGAAGAAGCGGTGCAAGAGGAAAACAGGAGAGGATTGGCAATACATAAACCACATTCCAAACTTAGAGTTGTTGTCATGA 3255 0.4144 MAEALLGFVLQNLESFVQYQRATYWGVNQQTDKLSSNLTAIRAVLRDAERKQITSELLKIWLQKLTDAAYVLDDILDECSIHFTKMHSHDGHTSCLSRLHPNDILFRFNIAKRMKDITQRFHDIHEERRTFELRDGVTEKPTVDDGEDDQTTSVITERRFYGRDDDQEKIVKVLLEANNNEDLTVYPIVGMGGLGKTTLAKHVFHDDRVCKHFDLTIWVYVSVDFNVKAILQSIIEYATGQNPNLHTLEAMGKKVEEVLQSKRYLLVLDDVWNENQEKWKDLEGMLRFARGAKGATVLVTTRLEEVASIMETHPAYHLTELSEYDSWSLFKSYAFGPNREEKKELAAIGEDIVKKCVGSPLAIKTLGSLLHDQTAVTQWENIKESEIWDIRSESSSMTGKENSIMRALKLSYFNLELSLRRCFSFCAIFPKGFEIVKEELIHLWMANGFIKSEGNVEVEDVANNVWRKLYRRSFFQEAKSDKFGTITSCKIHDLFYDLAKSIMGEECAAFVDRRLPQLSTRVHYLSYYYVPFNHYFRESMHVFKKVESLRTFLDLRTFPGSFCGVPSNHSLRALCTQSSSLSPLKDLTHLRYLSLTCHSKASLNNLICQMPKLQILKLKDPFLRGLPKNLTQLQDLRHIVMDDCKSVVETLPKISKLRHLRTLSIFVVGSKPGCGLADLRIRGLENVPNEGDAKQANLMSKKELNRLHLSWGSSANSEGSNVSVERVLEALEPPSALKSFGMRGYQGRQLSNWMKSVLVMRDLVEVELLDCDNCEELPPLGKLPHLKILYISEMKNVKWIDGETYDGVEEKAFPSLEKLTVRNLPNLERMLREEGVEMLPRLSKLRIDGVLSFKVPRLPCVETLHATGIEDVTSFMEGVGENMACLKTLSIYCIKGVVVLPDEFRRLGALQVLYIGEWYDLEYFPEHVMEGLTSLRTLSIEFCEKLKSLSEGVGHLACLERLTISKCPELVLPSNMSQLTALRKVSINYFCTLPDGLQRVPSLRVLDICGCTSLPDWLGDMTTLEELSIRYCDELRSLPSSIQRLTNLSHLTIHYCPHLKKRCKRKTGEDWQYINHIPNLELLS 1084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03335 1084 Gene3D - 147 315 IPR027417 -
Vimu7g03335 1084 FunFam Probable disease resistance protein At1g63360 412 501 - -
Vimu7g03335 1084 Pfam Rx N-terminal domain 6 90 IPR041118 -
Vimu7g03335 1084 CDD RX-CC_like 2 124 IPR038005 -
Vimu7g03335 1084 PANTHER DISEASE RESISTANCE PROTEIN RP 38 827 IPR044974 GO:0006952
Vimu7g03335 1084 Pfam NB-ARC domain 164 412 IPR002182 GO:0043531
Vimu7g03335 1084 SUPERFAMILY RNI-like 839 1079 - -
Vimu7g03335 1084 Gene3D Ribonuclease Inhibitor 515 849 IPR032675 -
Vimu7g03335 1084 FunFam Probable disease resistance protein At1g61300 145 315 - -
Vimu7g03335 1084 Gene3D - 320 416 IPR042197 -
Vimu7g03335 1084 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 426 IPR027417 -
Vimu7g03335 1084 SUPERFAMILY L domain-like 476 850 - -
Vimu7g03335 1084 Gene3D - 418 501 IPR036388 -
Vimu7g03335 1084 Gene3D - 6 123 - -
Vimu7g03335 1084 Gene3D Ribonuclease Inhibitor 850 971 IPR032675 -
Vimu7g03335 1084 Gene3D Ribonuclease Inhibitor 972 1069 IPR032675 -
Vimu7g03335 1084 PRINTS Disease resistance protein signature 258 272 - -
Vimu7g03335 1084 PRINTS Disease resistance protein signature 356 370 - -
Vimu7g03335 1084 PRINTS Disease resistance protein signature 998 1014 - -
Vimu7g03335 1084 PRINTS Disease resistance protein signature 185 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03335 Vimu-Chr7 28256753 28260034 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03335 182 665 WRKY Transcription Factor Family AT5G45050 21.722 6.11e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03335 - - vum:124833357 1521.91