LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu7g03334	ATGAAGATCTTGCATGCATTGATTCTTGGCAACGGATGTGAGGAGCTCCCTGATGTTACTCTTAAAACCTTGCAGGAAGCGAGAACTCTTCTTGGTAAGTTGGAGTATCAGAGAGGTAATGTAGAAGGTCGTGCTCACACTGAATCGGCCTCGGGCTCTCAGCATTTGACTAGCTTGGTGCTTGAAGCCATTTACTTAAAAGTCAAGTCTCTACAAAAATTGGGGAAATTTACAGAAGATATTTTATCATATCCTAATATTCAAGAGGATAATAAATTGCAAGAGATAGTCAGCCATGATGTAGAGCTCCTTCCAGGGATTTGGAAGCAAGCTGGTTGCTATGATGAGGCAATCTCTGCTTATAGGCGAGCCCTTCTTAGTCAGTGGAACCTTGATAATGATTACTGTGCAAGAATTCAGAAGTCATTTGTTATGTTTTTGCTATACAGTGGGGCGAAGGCAAGTCCACCTACTTTAGCAGTTCAGATTGAAGGATCATATGTGCCTAAAAATAATCTTAAAGAGACTATTCTGCTATTGATGGTTCTTTTGAGAAAGTTTAGCCTTGGTAAGATGAAATGGGATCCATCAGTCATGGAACACCTTACTTTTGCACTTTCTATATGTAGTCAAACTTCTACTTTAGCAAAGAAAATTGAAGACTTGATGCCAGGAGTATACCATCGAATTTGGTGCTGTCAAAATGACTGTGCTTTGAGCCTGCTAAGGAAATCTTTGCACAAACATGAACGACCAAATGACCTTACATCATTATTGTTAGCAGCTCGGATCAGCAACTCGGATTCCCATCTTGCTGCTGAGAGAGTCAATAATGTTCGTGACCAAAATGAGCATTTGAAAGGTGTTGCTCTACAAATGTTGGGACTTTGTCTTGGAAAGCAATCTAAGGTTGCTTCCTCTGACTCTGAGAGGTCTCGCCTTCACTCCAAAGCTTTAGAGTCATTGATGGAAGCAATCAAATTGAAGCCAAACAATTCTGATCTGATTTTTGAATTGGCTGTTTATCATGCGAAACACCGAAACTTGTCTGCTTCTTTGTGCTCTGCAAGACATTTCTTTAATCAAACAGGTGATTGCTCTGAGGATGAGAAGTTGACGTGGGATCACAACACATCTCTATCTGACCAGGACTGA	1155	0.4069	MKILHALILGNGCEELPDVTLKTLQEARTLLGKLEYQRGNVEGRAHTESASGSQHLTSLVLEAIYLKVKSLQKLGKFTEDILSYPNIQEDNKLQEIVSHDVELLPGIWKQAGCYDEAISAYRRALLSQWNLDNDYCARIQKSFVMFLLYSGAKASPPTLAVQIEGSYVPKNNLKETILLLMVLLRKFSLGKMKWDPSVMEHLTFALSICSQTSTLAKKIEDLMPGVYHRIWCCQNDCALSLLRKSLHKHERPNDLTSLLLAARISNSDSHLAAERVNNVRDQNEHLKGVALQMLGLCLGKQSKVASSDSERSRLHSKALESLMEAIKLKPNNSDLIFELAVYHAKHRNLSASLCSARHFFNQTGDCSEDEKLTWDHNTSLSDQD	384

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu7g03334	384	SUPERFAMILY	TPR-like	107	349	IPR011990	GO:0005515
	Vimu7g03334	384	PANTHER	PROTEIN NPG1	49	366	IPR043376	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu7g03334	Vimu-Chr7	28251965	28253513	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vimu7g03334	24	364	Calmodulin-binding Proteins	AT2G43040	54.568	9.28e-128	382

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu7g03334	K21843		-	gmx:100814609	487.648