Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03303 ATGTCCAAATGTCTTGTAGGTGCATCAATTGTGATGTTTCATGGAGACCTTCCATATTCTTCAAAAGACATCATTAAGAAACTAGAGACTTTGAATGAAGAACACATAATAGGAATTGGGGGATTTGGAACTGTATACAAGCTTGCAATGGATGATGGGAATGTCTTTGCTTTGAAAAGGATTGTAAAGTTGAATGAGGGGTTTGATCGTTTTTTTGAGAGGGAGCTTGAAATTCTTGGTAGCATCAAACATCGTTATCTAGTGAACTTACGAGGATATTGCAATTCACCAACATCGAAGTTATTAATATATGACTACCTACCAGGTGGTAGTCTTGATGAAGCTCTTCATGGTAAGATCTCAAGTTCCTGTATTTTTGGGTAG 384 0.3698 MSKCLVGASIVMFHGDLPYSSKDIIKKLETLNEEHIIGIGGFGTVYKLAMDDGNVFALKRIVKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDYLPGGSLDEALHGKISSSCIFG 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03303 127 ProSitePatterns Protein kinases ATP-binding region signature. 37 63 IPR017441 GO:0005524
Vimu7g03303 127 ProSiteProfiles Protein kinase domain profile. 31 127 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu7g03303 127 Pfam Protein kinase domain 33 119 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu7g03303 127 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 19 117 - -
Vimu7g03303 127 FunFam LRR receptor-like serine/threonine-protein kinase FEI 1 5 106 - -
Vimu7g03303 127 Gene3D Phosphorylase Kinase; domain 1 6 106 - -
Vimu7g03303 127 SUPERFAMILY Protein kinase-like (PK-like) 13 120 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03303 Vimu-Chr7 28002430 28002813 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03303 7 119 Receptor kinase-like Gene Family AT2G35620 93.805 1.60e-71 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Vimu7g03303 Pkinase 6.6e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03303 - - gmx:100816028 227.254