Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03291 TCTTACGTTGTGACGACGATGACCGGACAATCTAGGAAGTGGATGGTCCTGGTGGCGACTATCTGGATTCAGGCCTTCACCGGCACAAACTTCGACTTCTCCGACTACTCCTCTTCCCTGAAATCCCTTCTCAACATCTCTCAGATCAAACTCAACTACCTCGCCACCGCCAACGACATGGGCAAGGTCTTCGGCTGGTCCTCCGGCCTCGCCCTCACTCGTCTCCCGCTCTCCGTCGTCATCTTCATCGCCTCCGCCATGGGACTCCTCGGCTACGGCCTACAGTGGCTCGCCATAAAAAATCTCATCTCCTTGCCTTATTACCTGTTCTTTCTTCTGAGTTTGTTGAGTGGCTGTAGCATCTGTTGGTTCAACACAGTGTGCTTTGTTCTCTGCATTAGGAATTTTCCAGTGAACAGACCCCTTGCATTGTCACTCACAGTGAGTTTCAATGGTGTGAGTGCTGCACTCTACACACTTGCGGCCAATTCAATAGACCCTTCATCTGATTCACTCTACCTTCTCTTGAACGCCCTTGTGCCTCTTCTCACTTCCCTTGCAGCACTAATCCCAATTCTTCTCCAACCTCCTTTAGACTCTCTCTCTAGATCTGCAGATGCTGCTAGCAGAAACTCAGTGATATTTCTAGTACTAAACATTCTCGCCATTTTCACTGGCATTTACCTCCTCCTCTTTGCCTCATCAACTTCTGACGAAGCCACCTCGAGGATCTACTTTGGTGGGGCCATTTTTCTCCTCGTATCCCCACTATGCATCCCTGGCACCATCTATGCTCGAGGTTGGTTTCACAATGCCATCCATTCCAGCTTTCAGGTGGAAGGCTCTGGCTTCATTCTTGTGCATGTTGATGATCTTGAGCTTCATAAAGAACTCCTCTCCCGTCAGAACAGTACTCTCAATCTCAGCAATGGAGATGATCACGACCTGTTGGGTGAGAATGGATCCGTGCATGGAGGTCAGAGGGCAAAAACCAGTGACGTGGGCTGTGACAAGGTGCTTGGTCAGGATCAGTTGGCAATGCTAGGAGAAGAGCACACCGCTGCAGAGGTAGTACAGAGGGTGGATTTCTGGCTCTATTATATTGCATACTTCTGTGGTGGCACAATTGGTCTTGTCTACAGCAACAATCTGGGACAGATAGCTCAATCTTTAGGCCTGGGTTCAAGTATATCTACCCTTGTCACGCTATACTCATCATTTTCTTTCTTTGGTCGCTTGCTTTCAGCTGTACCAGACTACATTCGAAACAAATTCTACTTTGCAAGAACCGGATGGCTAGCCATTGGGCTTTTCCCAACCCCAGTTGCATTTATATTGCTTGCTGTATCAGACAGTGAAGCTGCACTTAAAGTTAGCACTGCACTGATTGGTCTGAGTTCCGGTTTCATCTTCGCAGCAGCAGTGGCAGTTACATCGGAACTATTTGGACCCAACAGTGTGAGTGTCAATCACAACATTCTCATAACAAACATTCCAATTGGGTCTCTTCTGTATGGTTTTCTGGCTGCAGCGATCTACGATGCCAATGCTTACTTAGTCACGGGTGACTTTATGGGTGATACACTGATGTGCATGGGAAGGAAGTGCTACTTCTGGACATTTGTGTGGTGGGGAGGAATGTCTGTCCTAGGACTAGCTTCTAGTGTGCTGTTGTTCTTGAGAACCAAACACGCCTATGATCATTTTGAGAGACATCGTTCGAGGATTTTGGCGCAGTCACTTGTGTCTTAG 1752 0.48 SYVVTTMTGQSRKWMVLVATIWIQAFTGTNFDFSDYSSSLKSLLNISQIKLNYLATANDMGKVFGWSSGLALTRLPLSVVIFIASAMGLLGYGLQWLAIKNLISLPYYLFFLLSLLSGCSICWFNTVCFVLCIRNFPVNRPLALSLTVSFNGVSAALYTLAANSIDPSSDSLYLLLNALVPLLTSLAALIPILLQPPLDSLSRSADAASRNSVIFLVLNILAIFTGIYLLLFASSTSDEATSRIYFGGAIFLLVSPLCIPGTIYARGWFHNAIHSSFQVEGSGFILVHVDDLELHKELLSRQNSTLNLSNGDDHDLLGENGSVHGGQRAKTSDVGCDKVLGQDQLAMLGEEHTAAEVVQRVDFWLYYIAYFCGGTIGLVYSNNLGQIAQSLGLGSSISTLVTLYSSFSFFGRLLSAVPDYIRNKFYFARTGWLAIGLFPTPVAFILLAVSDSEAALKVSTALIGLSSGFIFAAAVAVTSELFGPNSVSVNHNILITNIPIGSLLYGFLAAAIYDANAYLVTGDFMGDTLMCMGRKCYFWTFVWWGGMSVLGLASSVLLFLRTKHAYDHFERHRSRILAQSLVS 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03291 583 Gene3D MFS general substrate transporter like domains 356 570 IPR036259 -
Vimu7g03291 583 SUPERFAMILY MFS general substrate transporter 11 564 IPR036259 -
Vimu7g03291 583 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 567 - -
Vimu7g03291 583 Pfam Nodulin-like 13 260 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03291 Vimu-Chr7 27942633 27946973 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03291 6 573 Nodulin-like Gene Family AT1G31470 56.766 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03291 - - gmx:100814771 955.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03291 7 27942633 27946973 Vimu7g03291 7 27942633 27946973 ECH
Vimu7g03291 7 27942633 27946973 Vimu11g00978 11 10141533 10146704 PCT