Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03281 ATGAACACTTTTTCTGTCCTTTTTCCATCGTTTTGTTCTGGAGCATGTCTTCCCATGCTTGTCTTCTTTATTATCAACTCTCTCTTGTGTGTCCCAAGCACAGCTGCCTCTATATTGGGAAACCAGACCGACCATTTGGTGCTGCTCAAATTTAAGGAATCAATATCAAATGATCCTTACAAAATCATTGCCTCTTGGAATAGTTCCATCCATTTTTGCAACTGGCCTGGAGTTACGTGTAATTCCATGAATCAAAGAGTTATAGAGTTAAACCTGGAAGGAAAACAGTTACAAGGTCTCATACCACCCCATATAGGCAATCTCTCTTTCCTAAACAGGCTTAACCTTGGAAACAACAGCTTTAGTGGAAAAATTCCACAAGAACTGGGTCGGTTGTTACAGTTACAAAACCTATCTCTCACCAATAACTCTTTGAAAGGAGAAATACCTGCAAACTTGACAAGATGTTCTAAGCTTAGAGAGTTACACTTGTTTGGTAACAATTTGATTGGTGAAATACCAATGGAAATTGGCTACCTGCAAAAGCTTCAAGAACTGACCTTGGCAGTAAACAATCTCACAGGAGTAATCCCATCTTCCATAGGGAATCTTTCATCTCTCGTTTCTCTCTCAATCGGTGTCAATTACTTCGAGGGAAATATTCCACAAGAAATTTGTCTCCTCAAAAACTTGTCATTGATGTCATTGCATGTCAACAAGCTGATAGGTACCTTTCCTTCTTGTCTTTACAATATGTCATCTCTTACCATTATTTCAGCTGCAGACAATCAATTTAATGGCTCCCTTCCACCAAACATGTTCCACACTCTCCCTAATCTCCGAGAATTCCTTGTTGGTGGGAATCATATCTCAGGTTCAATCCCAACTTCCATTGCAAATTCATCTGTCCTCCAAACACTTGATGTTGGTACAAATCATTTAGAGGGCCAAGTTCCAAGTCTTGGAAAGCTGCAATACCTTTGGTTCCTTAGTCTGTATAGCAATAACTTAGGTGACAATACGACAAAGGACTTGGACTTTTTAAAATCCTTAGCCAATTGTAGCAAGTTGGAAGTGGTTTCTATTTCCTATAATAGTTTTGGAGGTAGTTTGCCGAATTTTATGGGAAATTTATCCACCAAACTTAGTCAATTATATCTTGGGGGTAATCACATATCAGGAAAAGTTCCTGCAGAAATAGGCAATCTAGTTAGCTTAACTATCTTGACCATGGAAATTAACCACTTTGAAGGAGTTATTCCAGCCACTTTTGGGAAGTTCCAGAAACTACAAAAGTTGGAGTTAAGTAGGAACAAGTTGACAGGAGATATTCCAGATTTTATAGGCAACCTCACTCAGTTGTATTATTTGGGCATGGCAGAAAATTTGTTTGAAGGAAAGATTCCTCAAAGTATAGGAAACTGTCAAAATTTGCAATACCTTAACCTTTGGAAAAACAACCTTGTAGGAAGCATACCCTTAGAGATTTTTACTCTTTTCTCGTTAACAAACTTACTGGACTTGTCACAAAATTCACTGAGTGGCAGGCTTCCTGATGAAGTTGGCCGGTTAAAAAATATTGGGAAGATGAGTGTGGCGGAAAATAATCTGTCTGGTGAAATTCCTGAAACCATTGGAGACTGTATAAGCTTGGAGTACCTTTGTCTGCAAGGAAATTCCTTTCATGGAATCATACCTTCCTCTCTGGCTTCACTCAAAGGTCTTCGAGTATTAGACATGTCACGAAATCTTCTGAATGGATCAATTCCTAAGGATCTACAACATATTTCTTTCTTAGAATACTTCAATGTATCTTTTAACATGTTGGAAGGTGAAGTACCACTGGAAGGTGTCTTTCAAAATGCAAGTGAGTTAGCCGTGGCTGGGAACAATAATCTCTGTGGGGGTGTTTCACAGTTGCATCTACCACCGTGTCCTATCAAAGGTAAGAAACCTGCAAAACACTTGAATTTTCTATGGATCACAATGGTGGTAGTTAGTGCAGTAGTTTTTCTTCTTGTTCTGACATTTTTTGTATCTATCTACCGGTTGAGGATAAGAAACCACAAAAATCCATCGTCTGATTTGCCAATTATAGACCCAGTGGATAAGGTTTCATACCAAAACCTACACCAAGGAACCGATGGGTTTTCGGTTAAAAATTTGATAGGGTCTGGAAGTTTTGGCTCCGTATACAAAGGGACTATTGAGTTAGAAGGAGAAGAAAATGTTGTAGCCATAAAGGTTGTAAACCTTCAACAGAAGGGAGCTCAAAAGAGTTTCATTGCGGAATGTAATGCCTTGAAAAATATTAGGCATCGAAACTTGGTCAAGACTGTAACATGTTGTTCTAGCATAGATCACAGAGGCCAAGAATTCAAAGCTCTTGTTTTTGAATACATGATAAATGGAAGCCTAGAAAGATGGTTGCATCCAGAAATAGAAACTTCAAAGCAACCCGCTAGATCATTAAACATTGACCAAAGATTAAACATTATCATTGATGTTGCTTCTGCTATTCACTATCTTCACTACGAATGTGGGCAAGCCATTATTCACTGTGATTTGAAGCCAAACAATGTTCTTCTCGATGATTGTTTGGTAGCTCATGTAGGCGACTTTGGTTTAGCTAGAAGACTCCCAACTATTGCAGTTTCTCCAAAACAAACTAGCACCATTGAAATAAAGGGCACAATTGGTTATGCTCCTCCAGAATATGGAATGGGATCAGAAGTGTCTGTAGAAGGCGACGTGTACAGCTTTGGAATTATTGTTTTGGAAATGTTGACAGGGAGAAGACCAATAGATGAAATGTTTGAAGATGGTCTTAATCTCCATAACTACGTCAAAATTTCAATTCCAAACCACCTTCCTCAGATTGTGGACCCAACTATTCTTCCAAATGGAATAAAGGTGGCTGCTGATAGCCAGAATCTTCTTCCAATGCATCCTATGGTAGAGAAATGCTTACTATCACTTTTTAGGATTGCACTTGCTTGTTCAAAGGAATTGCCGAAAGAAAGAATGAGTATGGTTGATGTCATCAGGGAGCTTCATTTGATCAAAAGTTCATTTTCACCATGA 3084 0.3868 MNTFSVLFPSFCSGACLPMLVFFIINSLLCVPSTAASILGNQTDHLVLLKFKESISNDPYKIIASWNSSIHFCNWPGVTCNSMNQRVIELNLEGKQLQGLIPPHIGNLSFLNRLNLGNNSFSGKIPQELGRLLQLQNLSLTNNSLKGEIPANLTRCSKLRELHLFGNNLIGEIPMEIGYLQKLQELTLAVNNLTGVIPSSIGNLSSLVSLSIGVNYFEGNIPQEICLLKNLSLMSLHVNKLIGTFPSCLYNMSSLTIISAADNQFNGSLPPNMFHTLPNLREFLVGGNHISGSIPTSIANSSVLQTLDVGTNHLEGQVPSLGKLQYLWFLSLYSNNLGDNTTKDLDFLKSLANCSKLEVVSISYNSFGGSLPNFMGNLSTKLSQLYLGGNHISGKVPAEIGNLVSLTILTMEINHFEGVIPATFGKFQKLQKLELSRNKLTGDIPDFIGNLTQLYYLGMAENLFEGKIPQSIGNCQNLQYLNLWKNNLVGSIPLEIFTLFSLTNLLDLSQNSLSGRLPDEVGRLKNIGKMSVAENNLSGEIPETIGDCISLEYLCLQGNSFHGIIPSSLASLKGLRVLDMSRNLLNGSIPKDLQHISFLEYFNVSFNMLEGEVPLEGVFQNASELAVAGNNNLCGGVSQLHLPPCPIKGKKPAKHLNFLWITMVVVSAVVFLLVLTFFVSIYRLRIRNHKNPSSDLPIIDPVDKVSYQNLHQGTDGFSVKNLIGSGSFGSVYKGTIELEGEENVVAIKVVNLQQKGAQKSFIAECNALKNIRHRNLVKTVTCCSSIDHRGQEFKALVFEYMINGSLERWLHPEIETSKQPARSLNIDQRLNIIIDVASAIHYLHYECGQAIIHCDLKPNNVLLDDCLVAHVGDFGLARRLPTIAVSPKQTSTIEIKGTIGYAPPEYGMGSEVSVEGDVYSFGIIVLEMLTGRRPIDEMFEDGLNLHNYVKISIPNHLPQIVDPTILPNGIKVAADSQNLLPMHPMVEKCLLSLFRIALACSKELPKERMSMVDVIRELHLIKSSFSP 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03281 1027 Gene3D Ribonuclease Inhibitor 44 158 IPR032675 -
Vimu7g03281 1027 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 801 1027 - -
Vimu7g03281 1027 SUPERFAMILY L domain-like 42 337 - -
Vimu7g03281 1027 Gene3D Transferase(Phosphotransferase) domain 1 801 1026 - -
Vimu7g03281 1027 Pfam Leucine rich repeat 405 463 IPR001611 GO:0005515
Vimu7g03281 1027 Pfam Leucine rich repeat 550 609 IPR001611 GO:0005515
Vimu7g03281 1027 Gene3D Ribonuclease Inhibitor 274 349 IPR032675 -
Vimu7g03281 1027 FunFam LRR receptor-like serine/threonine-protein kinase EFR 347 651 - -
Vimu7g03281 1027 Pfam Protein kinase domain 718 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu7g03281 1027 ProSitePatterns Serine/Threonine protein kinases active-site signature. 851 863 IPR008271 GO:0004672|GO:0006468
Vimu7g03281 1027 SMART serkin_6 717 1026 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu7g03281 1027 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 80 346 - -
Vimu7g03281 1027 Gene3D Ribonuclease Inhibitor 166 273 IPR032675 -
Vimu7g03281 1027 ProSitePatterns Protein kinases ATP-binding region signature. 723 748 IPR017441 GO:0005524
Vimu7g03281 1027 SUPERFAMILY L domain-like 381 635 - -
Vimu7g03281 1027 SMART LRR_typ_2 427 451 IPR003591 -
Vimu7g03281 1027 SMART LRR_typ_2 132 156 IPR003591 -
Vimu7g03281 1027 SMART LRR_typ_2 403 426 IPR003591 -
Vimu7g03281 1027 SMART LRR_typ_2 277 301 IPR003591 -
Vimu7g03281 1027 SMART LRR_typ_2 499 524 IPR003591 -
Vimu7g03281 1027 SMART LRR_typ_2 180 203 IPR003591 -
Vimu7g03281 1027 SMART LRR_typ_2 252 276 IPR003591 -
Vimu7g03281 1027 SMART LRR_typ_2 572 595 IPR003591 -
Vimu7g03281 1027 PANTHER RECEPTOR-LIKE PROTEIN 55 382 1023 - -
Vimu7g03281 1027 Gene3D Ribonuclease Inhibitor 350 646 IPR032675 -
Vimu7g03281 1027 SUPERFAMILY Protein kinase-like (PK-like) 689 1020 IPR011009 -
Vimu7g03281 1027 ProSiteProfiles Protein kinase domain profile. 717 1020 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu7g03281 1027 FunFam LRR receptor-like serine/threonine-protein kinase EFR 688 800 - -
Vimu7g03281 1027 Pfam Leucine rich repeat N-terminal domain 42 81 IPR013210 -
Vimu7g03281 1027 Gene3D Phosphorylase Kinase; domain 1 698 800 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03281 Vimu-Chr7 27864779 27867960 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03281 41 1025 Receptor kinase-like Gene Family AT3G47570 45.783 0.0 846
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Vimu7g03281 Pkinase 3.2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03281 - - gmx:100786600 1627.07