Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03279 ATGGCTTGGAACAGTTGCGATGGAATCTCCGTGAGGCGCAGTGAAGCGGAAGTGGTGGTGGCGGCAAAAGCTACTCGAAATGAAGTAAAGCATCTTTCGGACATTGATGACCACGAAGGGCTTCGCATGCACCTCTCCTTCATCATGTTCTATAAAAGGGAGGAGGCGATGAAGGAGTTTGATCCTGTGATGATCATAAAAAGGGGAATATCTGAAGCTCTTGTTCACTACTATCCCTTGGCTGGGAGGGTGGCGGAAGGGCCTAACAGAAAGCTGGTGGTGGAGTGCACCGGTGAGGGGGTTATGTTTGTTGAAGCTCAGGCTGATGTTTCATTGGAGGACCTCGGTGACTCAATTGGACCACCTTGTCTCCATAGGAAACACTTCCTCTATCAACTGCCTGCATCTCAAGAAATTCTTGCCTCTCCTTTGTTGTTCTTTCAGGTAACTCGTCTGTTATGCGGAGGGTTCGTATTTGCCGTGTGCATGAATCACGTCGTGTGCGACTCTTTCGGGCTGGTTCAGTTCCTCAACACGGTGGCAACAATGGCAAGGGATCCACACGCCGCAATCCAACAACCGGTGTGGAGAAGAGACATATTTAGCGCACGCAACCCTCCTCGTGTAACATGCACACACCACGAGTTCGAGGATGTTCTCCACCATAGTACTACAACTACTTCATCTTCACACGAAGACTTGTCTCACGAATCATTTTTCTTTGGGAAGAAAGAGATTCAAACGCTTCGTGATCATCTTCCCCAGAACCTTCAGAAATGCTCAACTGTCGAGTTACTTACGGCATGCTTATGGAAGTGTCGTACAATGGCGCTTGATCTTGACCCGAACGAGGTGGTTGGTGTGTCGAGTTTCGTCACTACTCATGGGAAGGTGGATGTGCCAAAAGGGTATTATGGGAATGCGTTTGTGTTTCCAATGGCACTGTCAAAGGCTGGTTTGTTGTGCGAAAACTCGTTAGGGTATGCTTTGGGGTTGATCAGAGAAGCGAAGGGTCGAATGAGTGAAGAGTACGTTAGGTCAATGGTTGATCTTATGGTTCTGAAGGGGCGTCCTATGTATAGGACACAAGGGAGTTTCTTTGTAGGGGATATGACTCGTGTGGGTTTTGGTGAAGTTGATTTTGGTTGGGGAAAGCCCGTTTATGGAGGCCCTGTTGGAGCCATACCATTATCCAGCTACCTTGCAAGGTTCAAAAATGGGATTATGGTGCCCATATTGTTGCCACAGCTTGTCATGAAAAAGTTTCTCAGGGAGCTCTCCAAAATTACTAGTGAAGAGGAGTTTGATCTTAGTAAATTGCAACGCATAGCATTTGATTCTTCAAGACAGTACAAGCCATTAATCTTCCTAGCTGCTCCAATCATCTTGAAATGTATCTGGGAAGCAAAAGCAAGAACAGAAGAAGAGGTGGAGAGTAAGAAACACAACGAATGGAGTTTGGTCCTCTTCCTAACGATCTCTGTTCAATTTGCCATGCCAACTTTCACATTCCTTTTGAAGCCAATTGCTCTCACTGGTTTTGTGGTATCAAAACCCTCTCCTTCGCTTTCTCTTTTCACCCTTCAATCTTTCATCCATCAATTTGCAACCTTTTCATTTTCTAGCAAATTGCATCATGCTCGTGTGGCAACATGCATCAGGACACAAGCACTTGCAAATGCCCTCTCTGTCGCCGACCGATCACTCTCTCAGCCATCGTCGTGA 1725 0.4667 MAWNSCDGISVRRSEAEVVVAAKATRNEVKHLSDIDDHEGLRMHLSFIMFYKREEAMKEFDPVMIIKRGISEALVHYYPLAGRVAEGPNRKLVVECTGEGVMFVEAQADVSLEDLGDSIGPPCLHRKHFLYQLPASQEILASPLLFFQVTRLLCGGFVFAVCMNHVVCDSFGLVQFLNTVATMARDPHAAIQQPVWRRDIFSARNPPRVTCTHHEFEDVLHHSTTTTSSSHEDLSHESFFFGKKEIQTLRDHLPQNLQKCSTVELLTACLWKCRTMALDLDPNEVVGVSSFVTTHGKVDVPKGYYGNAFVFPMALSKAGLLCENSLGYALGLIREAKGRMSEEYVRSMVDLMVLKGRPMYRTQGSFFVGDMTRVGFGEVDFGWGKPVYGGPVGAIPLSSYLARFKNGIMVPILLPQLVMKKFLRELSKITSEEEFDLSKLQRIAFDSSRQYKPLIFLAAPIILKCIWEAKARTEEEVESKKHNEWSLVLFLTISVQFAMPTFTFLLKPIALTGFVVSKPSPSLSLFTLQSFIHQFATFSFSSKLHHARVATCIRTQALANALSVADRSLSQPSS 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03279 574 Gene3D - 216 425 IPR023213 -
Vimu7g03279 574 PANTHER ACYL TRANSFERASE 4 9 426 - -
Vimu7g03279 574 Pfam Transferase family 11 425 - -
Vimu7g03279 574 Gene3D - 6 215 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03279 Vimu-Chr7 27850970 27860234 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03279 42 396 Monolignol Biosynthesis Gene Families AT5G48930 29.380 5.82e-43 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03279 K19861 - gmx:100817429 518.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03279 7 27850970 27860234 Vimu7g03279 7 27850970 27860234 ECH