Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03261 ATGATGATGATGTTTGAGGATATGGGGTTTTGTAATGATTTGGACACGATGTCTATTGTCCTCGGGGACGAGGATATCAGCGCCCAACAAACTGATCCAGAGGCGATAGTTGAGGATGATTTCAGTGATGAAGAAATTGGGGTAGATGAGCTTGAAAGGAGGATGTGGAAGGACAAGATGCATCTCAAGCGATTGAAGGAGCAGAGTAAATCTAAGGAAGGAATTGATGCGGTGAAGCAAACACAATCTCAAGAACAGGCAAGGATATCTGATAATCTTCGTGAATGGTGGAAGGATAAGGTCAGATTCGATCGAAATGGTCCAGCTGCCATAGCCAAATACCAAGCTAATCATTCTATACCTTGCAAGCGCGGAGACCCACCTCCGATTTTGAAAAACGCCACCCCAAATCGCGGACTTCCATGGTCGTCGCGTCAACTCACTTGTCCTCTCCATCATCGCGCCAGCATGCTCCTCCGCAACAGCCCAGGCCACAGAAAACCCAACACCGTTGCACCACCAATGACGGCAAAGCCTTGCCTCCCCACCTCCGCCACGTTCAATCGAAATCCAGCCCTTGATTTACACATTGCTGCAAGGAGGAAAAAGATATCCAGGGCTCAAGATGGAATCTTGAAGTACATGCTGAAGATGATGGAGGTTTGCAAGGCACAAGGATTTGTTTATGGGATAATCCCCGAGAAGGGAAAACCAGTGACAGGAGCATCTGATAATCTTCGAGAAGGCGAGAAATTATGCCAAATTACTTTGTCTAATTGCATCTGA 786 0.4695 MMMMFEDMGFCNDLDTMSIVLGDEDISAQQTDPEAIVEDDFSDEEIGVDELERRMWKDKMHLKRLKEQSKSKEGIDAVKQTQSQEQARISDNLREWWKDKVRFDRNGPAAIAKYQANHSIPCKRGDPPPILKNATPNRGLPWSSRQLTCPLHHRASMLLRNSPGHRKPNTVAPPMTAKPCLPTSATFNRNPALDLHIAARRKKISRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREGEKLCQITLSNCI 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03261 261 Gene3D - 196 253 IPR023278 GO:0003700|GO:0005634
Vimu7g03261 261 MobiDBLite consensus disorder prediction 65 86 - -
Vimu7g03261 261 Pfam Ethylene insensitive 3 194 248 IPR047091 GO:0003700
Vimu7g03261 261 Pfam Ethylene insensitive 3 89 123 IPR047091 GO:0003700
Vimu7g03261 261 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 9 88 IPR006957 GO:0003700|GO:0005634
Vimu7g03261 261 Coils Coil 48 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03261 Vimu-Chr7 27604218 27605382 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03261 199 248 EIL Transcription Factor Family AT3G20770 96.000 3.71e-25 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Vimu7g03261 EIN3 7.2e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03261 K14514 - gmx:100818629 190.66