Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03254 ATGGCAGAAGGTTTAGAATCAACGGGAGTTGTATCAGTGAGGGGTAGATCGTGGAAAGCTCATATGGGCATGACTCTGTCGCAGGCATTCTATGGTGGCTACCATGTAATCACAAAAGTGGCCCTTAATGTTGGGGTCAACCAACTAGTTTTCTGCTTCTACAGGGATCTCCTTGCCTTCACTATTCTTGCTCCTCTCGCTTTTTTTCTTGAAAGGCATGCTCTTTTTCCCCTTTACCTTCAACTACGAAGTAGACCACCCCTTACCAAGAAGCTATTGATGTCCTTTTTCATTCTTGGATTGACCGGGGTATTTGGCAACCAGCTTTTGTTTCTTATTGGTTTAAGTTATACTAATCCAACTTATGCTGCTGCTGTACAGCCAACCATTCCAGTTTTCACATTTTTGTTTACTTTGATGATGGGCATAGAAAAACTGAACTTGCTCAGATATGAAGGTTGGGCAAAGGCTGGAGGAACTCTTATCTGTGTTTCAGGAGCCATATTTATGGTTTTCTATCGTGGTCCAGCTGTGATAGGGGGTAACGAAATGGATCAAGTTGCACAAATTAAACCAAGTGGCAGAGGCCAGGCAGAGACTTCGGGATGGTTATTCAACAGTTATCTTGATATTGGATTAGATAACTTTCAGCTTGGGGTTGTGTTCTTGATAGGGAACTGCATCTGCATGGCTGCTTATCTAGCACTTCAGGCACCATTATTGAAAAAGTATCCATCAAATCTATCTGTCACAGCATATTCATTTGCCTTTGGAGTTGCACTGTTGGTGATTGCATCATTTTTCATGGTTAACGACTCAACTGACTGGATTTTGACACAATCAGAGATACTGGCTGTTGCATATGCTGGAACTATTGCATCTGCTCTTAACTATGGAATAATTTCATGGAGCACTAAGATCTTGGGGCCAGCTTTGGTTTCCCTTTACAATCCTCTTCAACCTGCATTTTCTGCCTTCCTTTCACAAATTTTCCTTGGCACTCCAATTTACCTGGGAAGCATCCTAGGGGGATCTTTCGTCGTTGCTGGTCTATATTTAGTTACTTGGGCATCTTATAGAGAAAGACAAGAAACTTATGGAGTTACTCCTAATGGCTCTTGGATCTCTGAGCCACTTCTTCATGAAAAAAAGTGTGGATTCATTTCAATGGCGACTGTTGGAGTTGGAGCGGGTGATATATGGAAGTCCCATGTGTCCATGGCGATGGTGCAGCTTTTCAATGGTGGCTACCATGTCATCACCAAAGTGGCCCTTAATGTTGGTATCAACCAGTTAGTCTTCTGTGTATTCCGCGATCTCATTGCCCTTTCCATCCTCGCACCCTTTGCTTATATCCGTGAAAAACAGATTCGACCACCCACTACTAAGAATCTACTGGTGTCATTCTTCTTTCTTGGATTAACTGGGATATTTGGCAACCAGCTTTTGTTTCTTATTGGTTTAAGCTATACTAATCCAACTTATGCGGCTGCCATACAACCGTCTATTCCAGTCTTTACCTTTATATTGGCTGTGATGATGGGTACAGAAAGAGTGAACTTAGTCAGATATGATGGTCTGGCTAAAGTTGGAGGAACCATCATTTGTGTTTCTGGTGCTGTAGTGATGGTTTTGTATCGTGGTCCAGCTTTGATAGGATATGCGGATATCAATCCTGCTATACAAAATGAAATAAGTGCCAAAGGTCAGCCAGAGCCATCTGGATGGCTAATTGGTAGTTTACAGGACTTCGGGTTAGACCATTTTCATCTTGGGGTTCTGTGCTTGATAGGGAACTGCATTTGTATGGCTGCGTTTCTAGCCATTCAGGCACCAGTTTTAAAAAAATATCCTGCAAACATATCAGTCACAGCATTTTCATACTCCTTCGGAGCTTTACTGATGGTTATAGTGTCATTATTCATGAATTATGAGGCAACTGATTGGACTTTGACATCATCAGAAATCCTTGCTGTTATGTATGCTAAGGCACGAAACAGGCTATCAATTATTGCCTATTGCTTGCTTGGCAAGCGGAAGCATTCTCTCTTGTTGAAGTGGAGTCAATGTTTTGATTTTGGCTCAAAGGTGATGACAACAAAAAGCAATGAGAGTATTTTCTTAAAGGCTGAAAAGATTGAAGGAACTGTTGCATCTGCCCTTAACTATGGACTCATTACATGGTGTAACAAAATCTTGGGGCCAGCCATGGTTTCCCTTTACAATCCGCTTCAACCTGCGTTTTCAGCCATCCTCTCCCAAATTTTCCTTGGAAGTCCAATTTACTTGGGAAGAGAAAAACGAGCATCTCTTGGAGTTGGAGTAGCTAGGCCTTCCTCTTGGGTCTCTGAACCACTTGTTCATGACAGAATTGCACTCCAGAAAGGCCGCGCTTTCTCTGGGTCCTCCTCTGTTTCCTCCAAAACCTTATCAGCTTAA 2439 0.4239 MAEGLESTGVVSVRGRSWKAHMGMTLSQAFYGGYHVITKVALNVGVNQLVFCFYRDLLAFTILAPLAFFLERHALFPLYLQLRSRPPLTKKLLMSFFILGLTGVFGNQLLFLIGLSYTNPTYAAAVQPTIPVFTFLFTLMMGIEKLNLLRYEGWAKAGGTLICVSGAIFMVFYRGPAVIGGNEMDQVAQIKPSGRGQAETSGWLFNSYLDIGLDNFQLGVVFLIGNCICMAAYLALQAPLLKKYPSNLSVTAYSFAFGVALLVIASFFMVNDSTDWILTQSEILAVAYAGTIASALNYGIISWSTKILGPALVSLYNPLQPAFSAFLSQIFLGTPIYLGSILGGSFVVAGLYLVTWASYRERQETYGVTPNGSWISEPLLHEKKCGFISMATVGVGAGDIWKSHVSMAMVQLFNGGYHVITKVALNVGINQLVFCVFRDLIALSILAPFAYIREKQIRPPTTKNLLVSFFFLGLTGIFGNQLLFLIGLSYTNPTYAAAIQPSIPVFTFILAVMMGTERVNLVRYDGLAKVGGTIICVSGAVVMVLYRGPALIGYADINPAIQNEISAKGQPEPSGWLIGSLQDFGLDHFHLGVLCLIGNCICMAAFLAIQAPVLKKYPANISVTAFSYSFGALLMVIVSLFMNYEATDWTLTSSEILAVMYAKARNRLSIIAYCLLGKRKHSLLLKWSQCFDFGSKVMTTKSNESIFLKAEKIEGTVASALNYGLITWCNKILGPAMVSLYNPLQPAFSAILSQIFLGSPIYLGREKRASLGVGVARPSSWVSEPLVHDRIALQKGRAFSGSSSVSSKTLSA 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03254 812 SUPERFAMILY Multidrug resistance efflux transporter EmrE 74 170 - -
Vimu7g03254 812 SUPERFAMILY Multidrug resistance efflux transporter EmrE 715 763 - -
Vimu7g03254 812 Pfam EamA-like transporter family 218 355 IPR000620 GO:0016020
Vimu7g03254 812 Pfam EamA-like transporter family 24 153 IPR000620 GO:0016020
Vimu7g03254 812 Pfam EamA-like transporter family 407 543 IPR000620 GO:0016020
Vimu7g03254 812 PANTHER WAT1-RELATED PROTEIN 22 362 IPR030184 GO:0016020|GO:0022857
Vimu7g03254 812 SUPERFAMILY Multidrug resistance efflux transporter EmrE 255 360 - -
Vimu7g03254 812 SUPERFAMILY Multidrug resistance efflux transporter EmrE 438 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03254 Vimu-Chr7 27514148 27524512 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03254 399 662 Nodulin-like Gene Family AT3G45870 68.182 1.21e-113 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03254 - - gmx:100793730 619.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03254 7 27514148 27524512 Vimu7g03254 7 27514148 27524512 ECH