Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03244 ATGACCATTGACGTGCCACCATCCAGTGCCCACAGTGTTAGAACAAACAGATTTTCTTTTGGTTCTAGCAATGGCAGTGAGGCCACTCCATTACACAACTATGCATCTGTTAGCAATGGTGATGGCTATGATAGTGATGGCTCTAATTTCACACCACCTACACCAACCACCCTATCAACTGCTATTCCAGCAGAACTTGCTGGAGCTGTACCCTTGATTGATAAATTCCAGGTGGAAGGATTCTTAAAACTGATGCATAAACAAATTCAGTCTGCTGGAAAACGTGGATTTTTTTCAAAAAGATCCGTAGGCCCCCAAGTTCGAGAGAAGTTTACATTTGAGGACATGCTTTGTTTCCAAAAGGATCCAATACCTACATCTTTGCTTAAGCTGAACAGTGACTTGGCAAGCCGAGCAACAAAGTTATTTGTAATAATTTTGAAATATATGGGAGTTGATTCATCTGACCGTGTAACTCCATTAAACTTAGATGAACGAGTCGAGCTTGTTGGTAAATTATACAAGCAATGTTTGAAGCGTTCAGAACTCCGTGACGAACTTTTTCTCCAGATATCAAAACAAACGAGAAACAACCCTGAGAGGGAATGCTTGATTAAAGCATGGGAGCTAATGTATTTATGTGCTTTGTCCATGCCTCCCAGTAAAGACATTGGAGCATATCTGTCAGAGTATGTTCATAATGTGGCACATGGTGTGCTTGCTGATCCTGAGATTCGAGCCCTTGCTTTAAATACGTTAAATGCTTTGAAGCACTCTGTCAAGGCTGGTCCTAGACATATAATACCTGGACCTATCGAGATTGAAGCCATGTTGACTGGGAAAAAGCTTACAACTATAGTGTTCTTCCTGGATGAAACATTTGAAGAAATTACATATGACTTGTCAACAACAGTTGCTGATGCTGTTGAGGAACTTGCTGGGATCATTAAATTGTCAACATACTCGAGCTTTAGCTTGTTTGAATGTCGTAAAGTTGTTACCGAGGAGTACATTGGATTAGACGATAATAAATATATCGGGGATCTGCTGGCGGAATTTAAGGCAGTTAAAGAACGAAGTAAAGGAGAAATTCTGCACTGTAAGCTAATATTCAAGAAAAGGTTATTTCGTGACTCAGATGAAGCTGTCACAGATCCAATGTTTTTGCAGTTGTCCTATGTACAATTGCAGCATGATTATATTTTGGGTAACTATCCTATTGGGAAGGATGACGCTTCTCAGCTTTCTGCACTGCAAATCTTGGCTGAGATAGGATTTGTTAGAAGACCAGAGTCATGCACTGACTGGAATTCATTCCTGGAGCGATTTCTTCCTAGACAAATTGCAATGACTCGAGCAAAACGGGAATGGGAGTTGGACATTCTTTCTTGCTATCATTCACTGGCGCATGTAACTAAAGATGATGCAAGACAACAATTTCTCCATATATTGAGAACAATTCCTTATGGGTTTTCTGTTTTCTTCAATGTTCGCAAAATTGATGATCCTATTGGACTCTTGCCTGGAAGAATTATTTTGGGAATCAACAAAAGAGGGGTCCATTTTTTCCGTCCTGTTCCAAAGGAGTATATGCACTCTGCTGAGTTGAGAGACATAATGCAATTTGGAAGCAGCAATACTGCAGTATTTTTTAAAATGCGAGTTGCAGGTGTTCTTCACATATTTCAGTTTGAGACAAAGCAGTTGCTAGAAAAGTTGCATCAGAAGCAAAAACAAGAAGAGGAAATGCTAGAAGAATTAGATGGCTTAAAAAAGTCTTTAAAAGCTGATAAGCAGAATCTTGCAGAAGTTACTGATGACCGTGACAAACTTAGGACTTTATGCCATGAAAAAGATAAGGAACTTCAGGCTAAAATTCTAGAGAAAAGAAACATGGAAGCACAGATGGCCAAGCTGAGTAATCTGGTTACTGAAAATGCCACCAAAAAGGACCCCCTTCAAGCAGATAACCAAGTGTCACAAAAACTAGAAGACGACCTAAAACTATGTAAAGGCGAGCTGCTTGAAGCTGAAGACACTATCAAAAGCTTGAGAAGTGAAAAGTTGATTCTGGAACAGAAGCTATCTGAGTTTGAGAAGAACAGTGAAGAAGAGATTAGTTCTCTACAATGTAAACTTGAGAAAGAACGCAAGAATTTGAACTCTCAGGTGTATGACCTTGAACGAAAACTGGAGATGTTTAGACAAGAATTAACTGTGGCCAAGTCTACACTTTCAGTCAAGGACTCTGAATTGGCTGCTTTGAAGAACAATTTAGATGAACTAGAAGAATTGAGAGAAATGAAAGAGGACATTGATAGAAAGAATGAACAGACAGCTGCCATTCTAAAGATGCAAGCGGCTCAACTAGCTGAAATGGAATTGCTTTATAAGGAAGAGCAGGTTCTAAGAAAGAGATATTTTAATACCATAGAAGATATGAAAGGCAAAATAAGAGTTTATTGTCGGTTAAGACCTCTTAGTGAAAAAGAGATTGCAAATAAAGAAAGAGATTCTCTTACTACTGTTGATGAGTTTACAGTTGAGCACCCATGGAAAGATGACAAGTCGAAACAACACATGTACGACCGTGTATTTGATGGTTATGCCACTCAAGAAGATGTATTTGAGGATACTAGGGCAAATGGTTATAATGTTTGCATATTTGCTTATGGTCAAACTGGCTCTGGAAAGACCTTTACCATCTATGGAACTGAAAACAATCCTGGACTCACCCCTCGTGCCACTGCAGAACTTTTTAGAATTTTAAGGAGAGATAGTAACAAGTATTCTTTTTCCTTGAAGGCATACATGTTGGAGTTATATCAAGATACACTTGTAGATCTCCTGTTACCCAAGAATTCAAAGCGTTTAAAATTGGATATTAAGAAGGATTCAAAGGGAATGGTAGCAGTTGAAAACGTAACAATTGTGTCCATTTCTAATGTGGAGGAATTAAATAGCATAATACAGAGGGGATCTGAGCAGCGACATACATCAGGAACACGAATGAATGACGAAAGTTCAAGATCTCATCTCATACTATCAATTGTCATTGAAAGTACCAACCTTCAAAGCCAATCAACCGCAAGGGGAAAGTTAAGTTTTGTGGATCTTGCTGGCTCAGAAAGAGTAAAAAAGTCAGGCTCAGCAGGTAATCAACTTAAAGAAGCTCAAAGTATCAACAAATCATTATCAGCACTAGGAGATGTTATCAGTGCTTTGTCTTCTGGTGGTCAACACATACCTTACAGAAATCACAAGCTAACGATGTTGATGAGTGACTCACTTGGGGGCAATGCCAAAACTCTCATGTTTGTGAATGTATCTCCAACAGAATCAAGCTTGGATGAGACACATAACTCTCTCATGTATGCATCACGAGTGAGATCAATTGTGAATGATCCAAGCAAAAACATTTCTTCAAAAGAAATAGCTCGACTGAAGAAACTGGTTGCATATTGGAAGGAGCAAGCAGGTAGGAGAGGAGAGGATGAAGAGTTGGAAGAAATTCAAGAAGAAAGACCAACTAAAGAGAAGAGTGATGGGAGGCATTCTATGTAG 3564 0.3906 MTIDVPPSSAHSVRTNRFSFGSSNGSEATPLHNYASVSNGDGYDSDGSNFTPPTPTTLSTAIPAELAGAVPLIDKFQVEGFLKLMHKQIQSAGKRGFFSKRSVGPQVREKFTFEDMLCFQKDPIPTSLLKLNSDLASRATKLFVIILKYMGVDSSDRVTPLNLDERVELVGKLYKQCLKRSELRDELFLQISKQTRNNPERECLIKAWELMYLCALSMPPSKDIGAYLSEYVHNVAHGVLADPEIRALALNTLNALKHSVKAGPRHIIPGPIEIEAMLTGKKLTTIVFFLDETFEEITYDLSTTVADAVEELAGIIKLSTYSSFSLFECRKVVTEEYIGLDDNKYIGDLLAEFKAVKERSKGEILHCKLIFKKRLFRDSDEAVTDPMFLQLSYVQLQHDYILGNYPIGKDDASQLSALQILAEIGFVRRPESCTDWNSFLERFLPRQIAMTRAKREWELDILSCYHSLAHVTKDDARQQFLHILRTIPYGFSVFFNVRKIDDPIGLLPGRIILGINKRGVHFFRPVPKEYMHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQLLEKLHQKQKQEEEMLEELDGLKKSLKADKQNLAEVTDDRDKLRTLCHEKDKELQAKILEKRNMEAQMAKLSNLVTENATKKDPLQADNQVSQKLEDDLKLCKGELLEAEDTIKSLRSEKLILEQKLSEFEKNSEEEISSLQCKLEKERKNLNSQVYDLERKLEMFRQELTVAKSTLSVKDSELAALKNNLDELEELREMKEDIDRKNEQTAAILKMQAAQLAEMELLYKEEQVLRKRYFNTIEDMKGKIRVYCRLRPLSEKEIANKERDSLTTVDEFTVEHPWKDDKSKQHMYDRVFDGYATQEDVFEDTRANGYNVCIFAYGQTGSGKTFTIYGTENNPGLTPRATAELFRILRRDSNKYSFSLKAYMLELYQDTLVDLLLPKNSKRLKLDIKKDSKGMVAVENVTIVSISNVEELNSIIQRGSEQRHTSGTRMNDESSRSHLILSIVIESTNLQSQSTARGKLSFVDLAGSERVKKSGSAGNQLKEAQSINKSLSALGDVISALSSGGQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPTESSLDETHNSLMYASRVRSIVNDPSKNISSKEIARLKKLVAYWKEQAGRRGEDEELEEIQEERPTKEKSDGRHSM 1187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03244 1187 ProSiteProfiles Kinesin motor domain profile. 817 1132 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu7g03244 1187 Coils Coil 566 607 - -
Vimu7g03244 1187 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 98 280 - -
Vimu7g03244 1187 Pfam FERM central domain 379 494 IPR019748 -
Vimu7g03244 1187 SMART B41_5 279 494 IPR019749 -
Vimu7g03244 1187 Gene3D - 377 488 IPR014352 -
Vimu7g03244 1187 Gene3D Kinesin motor domain 804 1134 IPR036961 -
Vimu7g03244 1187 Gene3D MyTH4 domain 98 280 IPR038185 -
Vimu7g03244 1187 Gene3D - 282 376 - -
Vimu7g03244 1187 MobiDBLite consensus disorder prediction 1 24 - -
Vimu7g03244 1187 Coils Coil 622 642 - -
Vimu7g03244 1187 ProSiteProfiles MyTH4 domain profile. 119 278 IPR000857 GO:0005856
Vimu7g03244 1187 SMART kinesin_4 815 1140 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu7g03244 1187 PRINTS Kinesin heavy chain signature 1002 1019 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu7g03244 1187 PRINTS Kinesin heavy chain signature 883 904 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu7g03244 1187 PRINTS Kinesin heavy chain signature 1082 1103 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu7g03244 1187 PRINTS Kinesin heavy chain signature 1033 1051 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu7g03244 1187 Coils Coil 660 737 - -
Vimu7g03244 1187 ProSitePatterns Kinesin motor domain signature. 1032 1043 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vimu7g03244 1187 PANTHER MYOSIN VII, XV 8 156 - -
Vimu7g03244 1187 Gene3D - 492 574 IPR011993 -
Vimu7g03244 1187 SMART MyTH4_1 119 278 IPR000857 GO:0005856
Vimu7g03244 1187 SUPERFAMILY Prismane protein-like 760 821 IPR011254 GO:0003824|GO:0016491
Vimu7g03244 1187 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 817 1160 IPR027417 -
Vimu7g03244 1187 CDD KISc_C_terminal 815 1134 - -
Vimu7g03244 1187 Pfam MyTH4 domain 172 276 IPR000857 GO:0005856
Vimu7g03244 1187 SUPERFAMILY Second domain of FERM 372 489 IPR035963 -
Vimu7g03244 1187 CDD FERM_B-lobe 389 486 IPR019748 -
Vimu7g03244 1187 Coils Coil 745 782 - -
Vimu7g03244 1187 Gene3D - 1135 1183 - -
Vimu7g03244 1187 FunFam Kinesin-like calmodulin binding protein 377 488 - -
Vimu7g03244 1187 ProSiteProfiles FERM domain profile. 283 588 IPR000299 GO:0005856
Vimu7g03244 1187 Pfam Kinesin motor domain 823 1132 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu7g03244 1187 MobiDBLite consensus disorder prediction 1158 1187 - -
Vimu7g03244 1187 FunFam Kinesin-like calmodulin-binding protein 761 1134 - -
Vimu7g03244 1187 SUPERFAMILY PH domain-like 494 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03244 Vimu-Chr7 27453516 27461369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03244 28 1182 Calmodulin-binding Proteins AT5G65930 64.893 0.0 1570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03244 - - gmx:100785619 1746.48