Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03232 ATGTCTTCTTCCAGTTATGCTAGAAGCAGAAGTACTTTTTTTTGTCTGTTTCTTGCAGTGTTTGTTGCAAAATCTAGCTTTTGCTTCTCTGCCAAGGTTTATGTGGTGTACATGGGAAGCAAAACTGGAGAAGACCCAGATGATATTCTGAAGCAGAATCATCAAATGCTTGCAGCTGTTCACAGTGGAAGTATTGAACAAGCCAAAGCTTCTCATGTTTATAGCTATAGACATGGTTTCAGAGGTTTTGCAGCCAAGTTGACTGATGAACAGGCTCAACAAATTTCAAAGATGCCAGGAGTGGTATCTGTTTTTCCCAATTCTAAAAGAAAGCTGCACACCACTCACTCATGGGACTTCATGGGACTTTCGAAAAACGAATCAATGGAGATTCATGGGTACTCCACAAAAAACCAAGAGAATGTCATCATTGGTTTCATCGATACGGGAATTTGGCCTGAATCCCCGAGCTTTAGAGACACCGACATGCCCCCAGTTCCTCGGGGATGGAAAGGTCAATGTCAATTAGGAGAAGCATTCAATGCTTCATCATGCAACAGGAAAGTGATAGGAGCAAGATACTATATGAGTGGACATGAAGCAGAAGAAGGGTCAGACAGAAAAGTCTCTTTCAGATCTGCCAGAGATAGCTCAGGTCATGGTAGCCACACAGCTTCTACAGCCGCAGGACGCTACGTGGCAAACATGAATTACAAAGGGCTAGCAAATGGAGGAGCAAGGGGAGGTGCCCCTATGGCTAGGATTGCAGTGTACAAAGTGTGTTGGGACTCAGGTTGCTATGATGTGGACTTGTTAGCAGCCTTTGATGATGCCATAAGAGATGGTGTTCACATTATATCTTTGTCTCTGGGTCCTGAAGCCCCCCAAGGTGACTATTTCAGTGATGCTATATCTGTTGGATCGTTCCATGCTGCTAGACGTGGAGTGTTGGTGGTAGCATCAGTCGGGAATGAAGGAAATCCTGGTTCTGCAACCAACCTTGCACCATGGGTGATCACAGTTGGTGCTAGCTCAACAGATAGGGATTTTATATCTGATATTACATTAGGAAATAGTGTTAACATCACGGGTGAGAGTCTCAGTCTCTTGGGAATGAATGCCTCTACAAGATTGATTGATGCATCTGAAGCCTTTGCAGGGTACTTTACTCCTTATCAATCCAGCTACTGTGTGGATAGTTCCCTAAATAAGACCAAGGCCACAGGGAAGGTTCTTGTGTGTCGACATGCAGAATATTCATCGGAGTCAAAGTTGGAAAAGAGTAGGATTGTGAAAGAGGCAGGTGCTGTTGGGATGATACTCATTGATGAGGCAAATCAAGGTGTTGCCACCCCATTTGTAATACCTTCAGCCATTGTTGGAACGAAAACTGGAGAACGGATTCTATCTTATATCAACAACACACGGTTTCATCGTATTATGGTAAACAGCATGCCTATGTCAAGGATTTCCAGAGCAAAGACAGTACTAGGAGTTCAGCCCGCTCCCCGTGTAGCATCATTTTCTTCTAAAGGTCCAAATGCATTAACCCCAGAAATTTTGAAGCCGGATGTCACAGCTCCTGGATTGAACATCCTTGCAGCATGGTCTCCAACTGCAGCTGGAATGAAGTTCAATATTTTATCAGGAACTTCTATGGCTTGTCCTCATGTAACTGGAATTGCAACTCTGGTCAAAGCTGTGCATCCTTCATGGTCTCCTTCTGCTATAAAATCTGCGATCATGACAACTGCAACAATTCTGGATAATCACCACCAACCCATTAGAGCGGATCCAGACAAAAGAAGGGCTAATGCATTTGATTATGGATCTGGCTTTGTGAATCCTACCAGAGTTTTGGATCCAGGTCTTGTCTATGATTCACATGCAAATGATTTCGTTGCATTCCTATGTTCACTTGGTTATGATGAGAGATCACTCCGCCTTGTCACAAGAGACAACAGCACATGTGAAAGGGCATTCAAAACACCATCGGAACTCAATTATCCATCTATTGCAGTCCCCAATCTAGAAGACACTTTTTCAGTAACCCGAGTTGTGACTAATGTTGGAAAAGCAAGAAGTGTATATAGATCTGTAGTGTTGTCTCCTGCTGGAGTTAATGTTACTGTTGTGCCAAATCGATTAGAGTTCACTAGTGTAGGACAGAAAATCAAGTTCAGTGTAAATTTTAAAGTGGCTGCTCCCTCAAAAGGCTATGCATTTGGTTTCTTGTTATGGAAAAACGGAATATCACAGGTCACAAGTCCTTTAGTTGTCCGGGTTGCACCACCAAGTCTTGGGTTGGTTCGATAG 2316 0.4339 MSSSSYARSRSTFFCLFLAVFVAKSSFCFSAKVYVVYMGSKTGEDPDDILKQNHQMLAAVHSGSIEQAKASHVYSYRHGFRGFAAKLTDEQAQQISKMPGVVSVFPNSKRKLHTTHSWDFMGLSKNESMEIHGYSTKNQENVIIGFIDTGIWPESPSFRDTDMPPVPRGWKGQCQLGEAFNASSCNRKVIGARYYMSGHEAEEGSDRKVSFRSARDSSGHGSHTASTAAGRYVANMNYKGLANGGARGGAPMARIAVYKVCWDSGCYDVDLLAAFDDAIRDGVHIISLSLGPEAPQGDYFSDAISVGSFHAARRGVLVVASVGNEGNPGSATNLAPWVITVGASSTDRDFISDITLGNSVNITGESLSLLGMNASTRLIDASEAFAGYFTPYQSSYCVDSSLNKTKATGKVLVCRHAEYSSESKLEKSRIVKEAGAVGMILIDEANQGVATPFVIPSAIVGTKTGERILSYINNTRFHRIMVNSMPMSRISRAKTVLGVQPAPRVASFSSKGPNALTPEILKPDVTAPGLNILAAWSPTAAGMKFNILSGTSMACPHVTGIATLVKAVHPSWSPSAIKSAIMTTATILDNHHQPIRADPDKRRANAFDYGSGFVNPTRVLDPGLVYDSHANDFVAFLCSLGYDERSLRLVTRDNSTCERAFKTPSELNYPSIAVPNLEDTFSVTRVVTNVGKARSVYRSVVLSPAGVNVTVVPNRLEFTSVGQKIKFSVNFKVAAPSKGYAFGFLLWKNGISQVTSPLVVRVAPPSLGLVR 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03232 771 Gene3D Peptidase S8/S53 domain 141 633 IPR036852 GO:0004252|GO:0006508
Vimu7g03232 771 Pfam Peptidase inhibitor I9 33 113 IPR010259 -
Vimu7g03232 771 ProSitePatterns Serine proteases, subtilase family, serine active site. 550 560 IPR023828 -
Vimu7g03232 771 ProSiteProfiles Serine proteases, subtilase domain profile. 117 620 - -
Vimu7g03232 771 FunFam Subtilisin-like protease SBT1.5 141 359 - -
Vimu7g03232 771 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 34 760 IPR045051 -
Vimu7g03232 771 FunFam Subtilisin-like protease SBT1.5 637 763 - -
Vimu7g03232 771 Pfam PA domain 385 468 IPR003137 -
Vimu7g03232 771 Pfam Fibronectin type-III domain 666 760 IPR041469 -
Vimu7g03232 771 Gene3D - 637 763 - -
Vimu7g03232 771 FunFam Subtilisin-like protease SBT5.3 23 113 - -
Vimu7g03232 771 SUPERFAMILY Subtilisin-like 17 721 IPR036852 GO:0004252|GO:0006508
Vimu7g03232 771 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 113 IPR037045 -
Vimu7g03232 771 PRINTS Subtilisin serine protease family (S8) signature 216 229 IPR015500 -
Vimu7g03232 771 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Vimu7g03232 771 PRINTS Subtilisin serine protease family (S8) signature 549 565 IPR015500 -
Vimu7g03232 771 Pfam Subtilase family 140 588 IPR000209 GO:0006508|GO:0008236
Vimu7g03232 771 CDD PA_subtilisin_like 353 478 - -
Vimu7g03232 771 Gene3D - 347 497 - -
Vimu7g03232 771 CDD Peptidases_S8_3 111 586 IPR034197 -
Vimu7g03232 771 MobiDBLite consensus disorder prediction 205 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03232 Vimu-Chr7 27406236 27412182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03232 34 762 Subtilisin-like Serine Gene Family AT2G04160 43.742 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03232 - - gmx:100780538 1368.99