Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03207 ATGGTCATGGAGGGAAGAGTCAGTGAGGATTTAACGCCCAGGTATTATGCCCTTTGTGCCATTGGAGGAATGCTCAGTGCTGGCACCACCCACCTTGCCATCACTCCTCTTGATGTATTGAAAGTGAACATGCAGGTGCACCCAATTAAGTATTACAGTATTTCCTCTTGCTTTACTACCTTATTGAGAGAACAAGGGCCTTCAGTCCTTTGGAAAGGTTGGACCGGCAAGTTCTTTGGCTATGGTGCTCAAGGAGGGTGCAGATTTGGTCTCTATGAGTATTTTAAAGGGGTTTATTCAAACGTATTGGTAGACCAGAACAAGAATTTTGTTTTCCTTCTCAGTAGCGCGTCAGCTGAAGTGTTTGCCAATGTAGCTCTATGTCCATTTGAAGCTGTTAAAGTGAGGGTTCAAGCACAACCCTGTTTTGCTAAGGGCTTGTTTGATGGCTTTCCAAAGTTATATGCGTCAGAAGGCACACGAGGGTAA 489 0.4479 MVMEGRVSEDLTPRYYALCAIGGMLSAGTTHLAITPLDVLKVNMQVHPIKYYSISSCFTTLLREQGPSVLWKGWTGKFFGYGAQGGCRFGLYEYFKGVYSNVLVDQNKNFVFLLSSASAEVFANVALCPFEAVKVRVQAQPCFAKGLFDGFPKLYASEGTRG 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03207 162 ProSiteProfiles Solute carrier (Solcar) repeat profile. 107 162 IPR018108 -
Vimu7g03207 162 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 9 162 IPR044677 GO:0005315|GO:1990547
Vimu7g03207 162 SUPERFAMILY Mitochondrial carrier 15 162 IPR023395 -
Vimu7g03207 162 ProSiteProfiles Solute carrier (Solcar) repeat profile. 14 98 IPR018108 -
Vimu7g03207 162 Gene3D Mitochondrial carrier domain 16 162 IPR023395 -
Vimu7g03207 162 Pfam Mitochondrial carrier protein 19 100 IPR018108 -
Vimu7g03207 162 Pfam Mitochondrial carrier protein 110 162 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03207 Vimu-Chr7 27147142 27151859 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03207 3 162 Chloroplast and Mitochondria Gene Families AT2G17270 66.460 1.24e-78 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03207 K15102 - gmx:100788974 318.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03207 7 27147142 27151859 Vimu7g03207 7 27147142 27151859 ECH