Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03188 ATGACTAAACTAAGGAGGCAACTCAATCAACTTGAATCTGATGGTCCTGAGGACTTCACTATGAAACATGAGGCCTCGGAGTCTGACTTGGACCAACTAGAGGATCCAGCAGAATCTTACATAAGAGACCTACTTGTTGCTTCTGGACTATACTTTGGTTCATGGGATAAGTCTTTATTAAGAGGGGACACATTTGCAAAGCCTATTGGCAACTCAGTTTATGAAGAAGTGGAAGAATCTCGCAGGAAATGGGTCAAGGAAGATGATGACAGCTGCATCAAGGATCACAATAAGAATAAACCAGGCCACAAAGTTTTGCTTGATCTGTTAAATGAGGCACTTTCAGTTGTTCTCGGACCTCCATTGACATTATCCAGATTCAGAAAAAAACTAAGTAACTCTTCCATGTTGCTACCTTCTGGAAAGGAACTATTGAACTTAGTGTGGGACATTATCCGTGTTTCTATATATCCTCCATCTGACATATCTACTTATTCACTTGATGATTTGGTGGCTCAACACCTAGGATCCATCCCCTGGTCTGAATTAATAAACGATGAGATCAATATTTTGGAAAGAGATATAGAATGTCTAATAACTGATGATCTGGTTGAAGAACTCATAAAGGATATATGTTCTAAGATGAAGTGA 651 0.3917 MTKLRRQLNQLESDGPEDFTMKHEASESDLDQLEDPAESYIRDLLVASGLYFGSWDKSLLRGDTFAKPIGNSVYEEVEESRRKWVKEDDDSCIKDHNKNKPGHKVLLDLLNEALSVVLGPPLTLSRFRKKLSNSSMLLPSGKELLNLVWDIIRVSIYPPSDISTYSLDDLVAQHLGSIPWSELINDEINILERDIECLITDDLVEELIKDICSKMK 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03188 216 MobiDBLite consensus disorder prediction 1 31 - -
Vimu7g03188 216 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 3 212 - -
Vimu7g03188 216 MobiDBLite consensus disorder prediction 10 31 - -
Vimu7g03188 216 Pfam Domain of unknown function (DUF4378) 39 206 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03188 Vimu-Chr7 26991762 26993008 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03188 1 211 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 40.265 7.47e-37 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03188 - - gmx:100779720 361.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03188 7 26991762 26993008 Vimu7g03188 7 26991762 26993008 ECH
Vimu7g03188 7 26991762 26993008 Vimu7g03188 7 26991762 26993008 PCT