Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03187 ATGAAAAAACTGATCAATGAGGAGCTATCCAAACAATCAAGCACCAGGCAAAATGCGCCAAGCCTTGTGGCAAGGTTGATGGGGATAGATACGATGCCATTAGACACTAAATATGTTGTCCCATCAGATAAAAGAATGAGTGAAAACGTGGGGAAGAAGTCTTCAGAGAAAGGAGTGAGTCGAAGGGGTTCAGTTAGTTGGGGTTCTTCTAACTTTAATTCTTCGAGCCAGATGGATTTTGAGTCATTATACGAAGACATGGATGTTGATGACAACGATGATGGGTGGAACAAGAGTTTTGGAGAACCAAGGCGGCGGGATCATCCTCAGGAAGAGGAACTACAGAAATTCAAGAAAGAGTTTGAAGCATATCAAGCAGCAAGGTTTCAAGAGTGTTCGAAGGTTGCTGAAATTGATAGTGTTCCTAAATGGTTGCTAGTTCAAGAAAACTCGAACAAGGAAAAGGTGATTCATAGTGATTTAGTTTTACAAAGAGCAGCAGCAGGGAAACCTGCAGATCTTGATAGCCATTCATTCAAAACACCACCACCTGAATATTATGGTTCAGAATATCGTGGTGACGTGATGGAGTTAGTCCCAGCTACTCAAAGGAAAACCTTTCCTCCTAGGAGCAGAACATTAAGTAGAGACTTTGAGGAGTCCTTAATGATGAAATCCTGCAACAGATTAGACACGTCTGCTTCTCCCACCAGGATAGTTATCTTGAAGCCTGGTCCTGAGAGCATTAGCAACCATGAAGAGAATTGGACCATTTCAACAGGAACTATACAAGGGAGAAATAGTATAGAAGATTTTCTTGAAGAGGTGAAAGAGCGTTTGAAATGTGAACTGCAAGGGAAAATTGTCAAAAAGATTTCTGTGGTTCGAGGGAGTGGAATTGAAACACCTTACAATGAAAAACCATCTGATCCTAAACTAATAGCTCGACATATAGTAAAGCAAGTCAGAGAAAGTGCGACCAGAGATGCTGACACAAATTTAATCCATTCTGAATCAACAGGATCGTTCAAGAGTGAAATGCAATTCAATGGAGCAACTTCCCCTGAAGTTATCAGCAGAGATACCCGGAAGTTCTTGTCAGATAGGCTTAGAAATGTTGTGAGAAGTGAAGCACGTGCTGGTTTTCTCGAGGGAAAATCAAGGTCACTTGCATTAGATAGTCATAAAGATGGACTAAAGCAAGGGGGGGATATTATGAAGTACGCAAGTAACTGGGAAATTTCCAAAGAGGACGCAGAAATACAAACAGGTTCTTTCAGACATGAACTGGATGAAAATATATTTCTGCACAAGGAGTTGTCTCCAAGGAATCTTGTAAGATCCTTGTCTGCTCCTGTATCACGATCAGGAACATCATTTGGGAAGCTTCTTCTGGAGGACCGCCACCTTTTAACTGGTGCACAGATTCGGAGGAAGCTTGAAGCTGTTGAAACTATGTCCGTTGATGTCAAGAAACGGAGAAAGGATAGATTTAATATTAAGGAACGAGTCTCCAATTTTAAATATAATCTTGCTTTAAGAGGGAGGCTTTTTGGCAGAAGGGTTCAATCAACGGTGGAATCACGTGCCAATGAGTATGGTCCCATGGTGAGAGATGTCACAAGTGGACCAACAGTTCTCATGAACTGCGGTGAGCGGCATGTAAGTTTGCCTTATATTTTTTTTACCATTCTCAGTGATGAACTTTGTTTTTCTCTTATTATATTTCATATATAG 1737 0.4099 MKKLINEELSKQSSTRQNAPSLVARLMGIDTMPLDTKYVVPSDKRMSENVGKKSSEKGVSRRGSVSWGSSNFNSSSQMDFESLYEDMDVDDNDDGWNKSFGEPRRRDHPQEEELQKFKKEFEAYQAARFQECSKVAEIDSVPKWLLVQENSNKEKVIHSDLVLQRAAAGKPADLDSHSFKTPPPEYYGSEYRGDVMELVPATQRKTFPPRSRTLSRDFEESLMMKSCNRLDTSASPTRIVILKPGPESISNHEENWTISTGTIQGRNSIEDFLEEVKERLKCELQGKIVKKISVVRGSGIETPYNEKPSDPKLIARHIVKQVRESATRDADTNLIHSESTGSFKSEMQFNGATSPEVISRDTRKFLSDRLRNVVRSEARAGFLEGKSRSLALDSHKDGLKQGGDIMKYASNWEISKEDAEIQTGSFRHELDENIFLHKELSPRNLVRSLSAPVSRSGTSFGKLLLEDRHLLTGAQIRRKLEAVETMSVDVKKRRKDRFNIKERVSNFKYNLALRGRLFGRRVQSTVESRANEYGPMVRDVTSGPTVLMNCGERHVSLPYIFFTILSDELCFSLIIFHI 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03187 578 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 554 - -
Vimu7g03187 578 MobiDBLite consensus disorder prediction 93 111 - -
Vimu7g03187 578 MobiDBLite consensus disorder prediction 38 70 - -
Vimu7g03187 578 MobiDBLite consensus disorder prediction 91 111 - -
Vimu7g03187 578 Pfam DUF761-associated sequence motif 15 33 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03187 Vimu-Chr7 26989687 26991423 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03187 1 543 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 37.037 2.99e-73 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03187 - - gmx:100789616 893.264