Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03179 ATGGTTCCAAACTTGCTCCATGATCTCCACGTGATATACAAGTTGGACAGGAAGGAGGAAGACAAAGATACAACTCTAGGATCTACAGGGGAAGAATGTCAAGGGAACAGCAACAATTTCCAACCATCAGAAAAAGTCTTTCCCGTTCTTGATCAGGATCTCAATTATCTTCCTTACGAAGAAGATGAGTCTGAGTTACTAGACAATGAGACAGATGTTGAAAGTTCACCAGTGTTACAGTATCTTGAAGTTGAAGTGTTTACTATCATGACTATATTGTTGTCGGCACCCAGTGACCTGGTAGCAAAAATTTCCTTATCAGATTTGGTCCAGTACTTTGGTATGCCAATCGTAGAAGCATCAAGAAATCTAAATGTTGGGCTTACTGTTCTCAAGAGAAAGTGCAGAGAATTTGGTATTCCCCGCTGGCCTCATAGGAAGATCAAGTCACTTGATGGTCTCATTCATGATCTTCAGGAAGAGGCAAAGAGCCAAGAATTGGAGGACATGGAAGCAGCAATTGCAGTGGCCAAGAGACAAAGGATGTTGGAGTGTGAAAAGGAAAACATAGAGAAAAAGCCCTTCATGGACATTCAAACCGAAACAAAGAGGTTCAGGCAAGATGTTTTCAAGAGAAGACACAGAGCAAGAGCTGTTGGAAAACATAATTCTACAGTATCCAACACATAG 690 0.413 MVPNLLHDLHVIYKLDRKEEDKDTTLGSTGEECQGNSNNFQPSEKVFPVLDQDLNYLPYEEDESELLDNETDVESSPVLQYLEVEVFTIMTILLSAPSDLVAKISLSDLVQYFGMPIVEASRNLNVGLTVLKRKCREFGIPRWPHRKIKSLDGLIHDLQEEAKSQELEDMEAAIAVAKRQRMLECEKENIEKKPFMDIQTETKRFRQDVFKRRHRARAVGKHNSTVSNT 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03179 229 PANTHER PROTEIN RKD4 75 224 IPR044607 GO:0003700
Vimu7g03179 229 MobiDBLite consensus disorder prediction 20 40 - -
Vimu7g03179 229 Coils Coil 148 180 - -
Vimu7g03179 229 ProSiteProfiles RWP-RK domain profile. 86 171 IPR003035 -
Vimu7g03179 229 Pfam RWP-RK domain 104 151 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03179 Vimu-Chr7 26931727 26933350 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03179 2 229 AtRKD Transcription Factor Family AT4G35590 48.927 5.44e-59 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Vimu7g03179 RWP-RK 8.8e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03179 - - gmx:113001653 364.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03179 7 26931727 26933350 Vimu7g03179 7 26931727 26933350 ECH