Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03175 ATGGATAATCATTTGCACCAACCTGCTTCACTTAATGGCTTCATTTGCAACAGACAAGAAGCTCAACTTCTGAAGGAATTGGTTTCTCATGGCTCTTGCCCTCATATTTTGCTCAAAGGACCCTCTGGTTCCGGGAAAAGAGAGCTAGCAATGGCTCTTCTTAGAGAAATATATGGTGATGCATGTTATAATCTGTCTCATGATTTAAGACACTTCCCTATTCAGGTAGAGATTTCTGGCTTTCCTACCTTAGCTTTTGATATGACCAAAGGCTTAAGAAAGTCTCTGTACCCATCCAGTCCTCCTCACATGGAGCTAGATGTAAATTCAGAACCAAATGCTAAATATGATGGACAGCTGTCCATTCTCAGAAGAACAACCAATTTCAGTTGTATGGGAGGAGATCGTAATAGAAGTTGCTACAGTCCTAGCTGA 435 0.4115 MDNHLHQPASLNGFICNRQEAQLLKELVSHGSCPHILLKGPSGSGKRELAMALLREIYGDACYNLSHDLRHFPIQVEISGFPTLAFDMTKGLRKSLYPSSPPHMELDVNSEPNAKYDGQLSILRRTTNFSCMGGDRNRSCYSPS 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03175 144 Gene3D - 4 133 IPR027417 -
Vimu7g03175 144 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 6 60 - -
Vimu7g03175 144 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 61 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03175 Vimu-Chr7 26911638 26912633 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03175 6 106 Core DNA Replication Machinery Family AT5G27740 38.614 5.77e-15 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03175 K10756 - gmx:100817775 157.918